Pseudomonas lundensis DSM 6252, TU74_RS21975 (ampC)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas lundensis strain DSM 6252 44_25635_26.8682, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CCAGCGGCTGCCAGTTGTCGATGGTCAGCGGGTCAATCAGGTAAGCCCGCTCCCCGTCGCCGATCTGAATCAAGCCGGCAATGGGGTAAAAGGTGTCGAC CCGCATGAATTCGGTGTCGAGGGCTACAAACGGCAAATGCTGCCATTGGGCGCAATGTTGGCCGAGGCTATCGTTGTCGCGAATCCAGTGAATATCGATG GCCACACGGCTCTCCCTTGAAGAATGGCGCGCAGTATATATCGGCATCAGGCATTTCCGGCGATTGACTGACAAACTTGTCGACGAAAAAACCTACATAA ATTCAGGCTTCCACCTTCAACACACGCCCCCGTTAAATGTGTATTTTCACCCAGCTCACGCCTCGAACAGCGTGCCTGCACGCTCACACCTGTGATGAAA CGCATCGCTGCTCCGTCATCAAGAAACATTCGGTGACAAGGCCGCACGCTGCATCCGACACAACCTGCCCTTTTTCCACAGAGACAAGAAGGACGCCCTC
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| DNA Sequence for Gene |
>TU74_RS21975
|ampC
ATGCGCCAGCCGTTAAAACACACCGTATCTACTCTTTTACTGTCGGGTTTGTGCGCCATGAGCATGCCCGCCGTGTCCGCGAGCCTCGACAGCACTGTGC GAGACGCCGCCCAAGCGGTGATGCAACAGTACAACGTGCCCGGCCTGGCCATCGCCATCAGCGTCGAAGGTCAACAGCATTTCTATAACTTCGGTGTCGC TTCAAAAATGACAGCCACCAAAGTGACCTCCGACACGCTGTTCGAAGTGGGTTCCATCAGCAAAACCCTGACCGCGACCCTGGCCACTTACGCTCAAGCC AATGGGCAACTGTCACTCACTAAGACGGTGAGTACGTACCTGCCCGAATTACGCAACACCCCGTTCGGCAACGTGACGCTGATCGGGCTGGCCACTCACA CGGCCGGCGGATTCCCGTTGCAGGTGCCCCATGATGTTCAAAACGATACACAACTCATGGCCTACCTCAAGGCCTGGCAGCCGACGTACCCGCAGGGCAC CCAGCGCAGCTATGCCAACCCCAGCATCGGCATGCTGGGGGTGATCGCCGCCAAACGCATGAACATGCCCTACACCGAGGCCATGCAAGACCATTTGCTG CCGGCATTGGGGATGAAAAGCAGCTATCTGCAGATCCCTGACAGCGAGATGCACCGCTACGCTCAGGGGTACAACAAAGAGGATGCGCCCGTACGTTTAG GGGCAGGCGTATTGGCGGACGAAGCCTACGGCCTGAAAACCTCGGCGCGCGACCTGATCCATTTCGCCGAGCTGAATGCAGGCCTTGGCCAGGTCAGCCC CCCCCTTCGCCGCGCCCTGGACACCACCCATACCGGTTACTTCCGGGCCGGGCCAATGACCCAGGACCTGGTGTGGGAGCAATACCCCTACCCGGTCACA TTGGCTGCACTGGTCGAGGGCAATTCGAACGCCATGGCCTACGACACTCAACCGGTTGAGGCCTTGAATCCACCGCTGGCCCCGCGCGCAGACAGCTGGA TCAACAAGACCGGCTCAACCAATGGCTTCGGTGGCTACATCGCGTTCGTGCCCGCCAAAAAGCAGGCCGTGGTCATTCTTGCGAACAAAAATTACCCGAA CGAAGCCCGGGTGAAATTGGCTCATGCGCTTTTCGAGGCGTTGAATTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CTGCCTTTGCGCAACACGAAAATGCTGCCCGCCGTGTGGCCGGGCAGCACATCGTATTGTTTGAGCACGCTGAAGCCCGCCTGTGAAAACTGGGCTTCGA TTGCGTCCTTGGCCACCCAGATGCGCTGCGGGTTCTGCGAGGGTTTGATAAACAGCGACAGGATCAACGTGTCACGGCTGACCCGGTGCAATTCGCGCAA GATCGCCAGACGGTGCTCGCTGTCACGCACATGGTGAAACAGCTGCATGCAAAAAATGCAGTCCACGGCGTTTTCAGGCATATCGATGGTAAACACCGAG CTTTTAAACAAGGTGACACGCGCCAGCAAGCCCGTCGAATGGTGGGTTAGGGCGTGATCGAGCATGCCCTGAGACGGATCGGCGGCCAGAATCACCCGGT TGCCATGCTCGGCCAACAACGGCCAGAAACGCCCGGCACCGCACGCCAGGTCCAGCACCAGCCCTGGCTCGCCCGCCACTTTGAGCGCGCGCCGAATCAG
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| Amino Acid Sequence |
>beta-lactamase/D-alanine carboxypeptidase
MRQPLKHTVSTLLLSGLCAMSMPAVSASLDSTVRDAAQAVMQQYNVPGLAIAISVEGQQHFYNFGVASKMTATKVTSDTLFEVGSISKTLTATLATYAQA NGQLSLTKTVSTYLPELRNTPFGNVTLIGLATHTAGGFPLQVPHDVQNDTQLMAYLKAWQPTYPQGTQRSYANPSIGMLGVIAAKRMNMPYTEAMQDHLL PALGMKSSYLQIPDSEMHRYAQGYNKEDAPVRLGAGVLADEAYGLKTSARDLIHFAELNAGLGQVSPPLRRALDTTHTGYFRAGPMTQDLVWEQYPYPVT LAALVEGNSNAMAYDTQPVEALNPPLAPRADSWINKTGSTNGFGGYIAFVPAKKQAVVILANKNYPNEARVKLAHALFEALN
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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