Pseudomonas lundensis DSM 6252, TU74_RS01905
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas lundensis strain DSM 6252 2_284784_27.2864, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GACGCCATGCTGGCGTGCCGCGAACGCAGCACGTTCATTCCGATTCTGGCCAACAGCTTCGCGCGGCACACCACTGAAGTGCTGGTCGAACATGCCGAGC GCGAGCACGGCGATTCCAAGTACAGCCCCATGCGCCTGATCAACCTGATGTTCGATCTGGTGACCTGCATGACCACCACGCCGTTGCGCCTGCTGAGCAT CATCGGCTTCAGCATGGCTTTGCTGGGCGGGCTGTTCGCCATCCTGCTGATCGTGTTGCGCCTGATCTTTGGGGCGACCTGGGCCGGTGACGGCACGTTC GTCCTGTTTGCGGTGCTGTTTGTGTTCACCGGCGGACAGTTCATTGGCATGGGCCTGCTGGGTGAATACCTGGGCCGCATGTACAGCGATGTGCGGGCCC GGCCACGCTTCTTTATCGAAAAAATCGTGCGCGCCGAGCCGGCCAAGGCTGACGTTTCGACGCCCCCTTCTTCTATTTCCACCTCGACACAGGTCCAATC
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| DNA Sequence for Gene |
>TU74_RS01905
ATGAGTTTGAAAGCCGTAGTTTTCGCCTATCACGATATTGGCTGCACCGGCATCGATGCTTTGCTCAACGCCGGGTATGAAATCGCAGCGGTGTTCACCC ATGCTGACGACCCGAAGGAAAACAACTTTTACGGTTCGGTTGCGCAGCTGTGCGCGCGCAAAGGCATCCCGGTGCATGCCCCGGAAGACGCCAACCACCC GTTGTGGGTCGAGCGCATTCGCAAACTGAACGCCGATTACCTCTTCTCGTTCTACTACCGCCATTTGCTGGGCGAAGAACTGCTCGCCAGCGTCAGCCAG GGCGCCTTCAACCTGCATGGCTCGTTGCTGCCGCGCTACCGTGGCCGCGCCCCGGCCAACTGGGTGCTGGTCAACGGTGAAACCGAGACCGGCGTCACCC TGCACCGCATGGTCAAACGCGCGGATGCCGGTGCCATTCTGGCCCAGCAACGGGTCAGCATCGAACGCAGCGACACCGCGCTGAGCCTGCACGCCAAACT GCGCGAAAGCGCGGCAGCCTTGTTGGCCGAAACCTTGCCCCTGCTGCCGGAAGGCAAGCTGACCGAAACCCCGCAAGACGAATCCAAAGCCACGTACTTC GGGCGTCGCACCGCCGCTGATGGCCTGCTGCAATGGGCGCGTCCGGCTGAAGAACTGTTCAATCTGGTGCGGGCGGTGACGCAACCGTATCCGGGCGCGT TCTGCGCCGTGGGCGAGCACAAACTGATTGTCTGGGCCGCCGAGGTGATGCCGGGCAATGCAGGGCTGGCGCCGGGCCACGTCATCAGCTGTGAGCCCCT GCGCATCGCCTGCGGCAAAGACTCGCTGGTCATCATCGCCGGTCAACGCAACGCCGACGGCCTGTACCTGAGCGGCCCGCAACTGGCCCGCGAACTGGGT CTGGTGGACGGCTCGCGCCTGCGCGGCAGTGAGTCCGGGCGCCCTGCCCGCCGCACCCGCGTGCTGATCCTCGGGGTCAACGGGTTTATCGGTAACCACC TGTCCGAGCGCCTGCTGCAAGACGACCGCTACGAAGTGTATGGCCTGGACATTGGCTCCGACGCCATTGACCGCCTGCGCAGCCACCCGAACTTCCACTT TGTGGAAGGCGACATCAGCATCCACACCGAGTGGATCGAGTACCACATCAAAAAATGCGACGTGGTCTTGCCGCTGGTGGCCATCGCCACGCCGATCGAG TACACCCGTAACCCGCTGCGGGTGTTCGAGCTCGACTTCGAGGAAAACCTCAAGCTCGTGCGCTACTGCGTCAAATACAACAAGCGGGTGATTTTCCCGT CGACGTCCGAAGTGTATGGCATGTGCCAAGACAAGAATTTCGACGAAGACACCTCCAACCTGATCGTCGGCCCGATCAACAAGCAGCGCTGGATCTACTC GGTGTCCAAGCAGTTGCTCGACCGAGTGATTTGGGCTTATGGCCAGAAAGGCCTGAAATTCACCCTGTTCCGTCCGTTCAACTGGATGGGCCCGCGTCTG GACCGTCTGGATTCGGCACGGGTGGGCAGCTCGCGCGCGATTACCCAACTGATTTTGCATCTGGTGGAAGGCACGCCGATCCGTCTGGTGGATGGCGGTG AGCAAAAGCGTTGCTTCACCGACGTGGCCGACGGCATCGAAGCGCTGGCGCGCATCATCGAGAACCGCGACGGCAAATGCGACGGCCAGATCATCAACAT CGGCAACCCGGAAAACGAAGCCAGCATCCGTCAACTGGGCGAAGAGTTACTGCGTCAGTTCGAAGCCCACCCGCTGCGCGACAACTTCCCGCCGTTCGCC GGTTTCCGCGACGTTGAGAGCCAGTCGTTCTACGGCACCGGTTATCAGGACGTCAGCCACCGCAAACCGAGCGTTGAAAACGCCCGTCGCCTGATCGACT GGACACCGACCACCGAACTGAGCGCAACCATTGGCAAGACTCTGGACTTCTTCCTGCGTGAAGCCATGGTAGAAATCGCGGAAAAACGCTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TGCAAGCAGGCCTGCGTATCGACGTCGACACGTACCGCGGAACCCGAGAAGGGGTTCCGCAACTGCTCGAACTGCTGGATGAAGCTCAAATCAAAGCCAC GTTTTTCTTCAGCGTGGGGCCGGATAACATGGGCCGCCATCTGTGGCGGCTGATCAAGCCCCAGTTCTTCTGGAAAATGATGCGTTCCAAAGCCGCCAGC CTGTATGGCTGGGACATTTTGCTGGCGGGCACCGCCTGGCCGGGCAAGCCGATTGGCAAGGAGCTGGGGCACCTGATGCGCCAGACCCTGGCCGCGGGCC ATGAAGTGGGCCTGCACGCGTGGGATCACCACGGCTGGCAAGCCAACGCCGGGCGTTGGTCGCAGGCGCAATTGATCGAGCAGATCCGCCGGGGTGTCGA CACCCTGAGCGACATCACCGGCCAGGCGGTCGAGTGTTCGGCCGCCGCGGGCTGGCGCGCCGATGAACGCGTGGTCGAGGCCAAGCAGGCCTTTGGCTTT
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| Amino Acid Sequence |
>UDP-4-amino-4-deoxy-L-arabinose formyltransferase
MSLKAVVFAYHDIGCTGIDALLNAGYEIAAVFTHADDPKENNFYGSVAQLCARKGIPVHAPEDANHPLWVERIRKLNADYLFSFYYRHLLGEELLASVSQ GAFNLHGSLLPRYRGRAPANWVLVNGETETGVTLHRMVKRADAGAILAQQRVSIERSDTALSLHAKLRESAAALLAETLPLLPEGKLTETPQDESKATYF GRRTAADGLLQWARPAEELFNLVRAVTQPYPGAFCAVGEHKLIVWAAEVMPGNAGLAPGHVISCEPLRIACGKDSLVIIAGQRNADGLYLSGPQLARELG LVDGSRLRGSESGRPARRTRVLILGVNGFIGNHLSERLLQDDRYEVYGLDIGSDAIDRLRSHPNFHFVEGDISIHTEWIEYHIKKCDVVLPLVAIATPIE YTRNPLRVFELDFEENLKLVRYCVKYNKRVIFPSTSEVYGMCQDKNFDEDTSNLIVGPINKQRWIYSVSKQLLDRVIWAYGQKGLKFTLFRPFNWMGPRL DRLDSARVGSSRAITQLILHLVEGTPIRLVDGGEQKRCFTDVADGIEALARIIENRDGKCDGQIINIGNPENEASIRQLGEELLRQFEAHPLRDNFPPFA GFRDVESQSFYGTGYQDVSHRKPSVENARRLIDWTPTTELSATIGKTLDFFLREAMVEIAEKR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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