Pseudomonas lundensis DSM 6252, TU74_RS19340
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas lundensis strain DSM 6252 29_69682_32.1408, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
ACCAAGAGTAAGGGTTAGCTGTGCGCCTGCGTTTGATCGCTGTCGGTTCGCGTATGCCTAAATGGGTGGAAGAAGGCTGGCATGAATATGCCAAGCGTCT GCCATCCGAGCTGGCCCTTGAACTGGTGGAAATACCGCTCAACACCCGCGGCAAAAATGCCGACGTGGCCCGCTTCATCCGTCAGGAAGGCGAGGCCATG CTGGCCAAAGTCGGTCCGGGTGAGCGTATTGTCACGCTGGAAGTGCATGGCAAACCCTGGAGTACCGAGCAGCTGGCGGTCGAGCTGGATCGCTGGCGCC TGGACTCGCGCACGGTGAACTTCATGGTGGGCGGCCCTGAAGGGCTGGCGCCGGAAGTCTGTGCACGGGCTGATCAGCGCTGGTCGCTGTCGCCGTTGAC GTTGCCGCACCCGTTGGTAAGGATTCTGATTGGTGAGCAGTTGTATCGCGCCTGGACGGTTTTGTCCGGGCACCCTTATCACAAATAGTCAGCGTCCCGA
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| DNA Sequence for Gene |
>TU74_RS19340
ATGTCTCAGCCAATTCGCCTCAAAGACCACGAGAAAGACGCACGCCTTGTGCGCAGCCGCGTTGTGGTCGGCGCAATTGTGGTGGTGGCGCTCATTTGTG CGCTGATTGCGCGCCTGTACTACCTGCAAGTTGTGCAGTACGAGTACCACTCGACCCTGTCTGAAAACAACCGGGTGCACGTGCAGCCCATTCCCCCGAC GCGTGGCCTGATTTTCGACCGCAACGGTGTGGTGATCGCGGACAACCGGCCCAGCTTCAGCCTGAGCATGACCCGCGAACGTTCCGGTGACTGGCAGCAA GTGCTCGATGTGATCGTCGAAGTGTTGCAGCTCACGCCAGAAGACCGTGCCTTGTTTGAAAAGCGCATGCGACAGGGGCGTCGGCCATTCGAACCGGTGC CCATTCTGTTTGAGCTCACCGAAGAACAGATCGCCCGGATTGCCGTGAATCAGTTCCGCCTGCCCGGGGTTGAAGTGGTCGCGCAACTGGTGCGCCACTA CCCGCAGGGCGCGCATTTTGCGCATTCGGTGGGCTATATGGGACGGATCAACGAGAAAGAGCTTAAAACCCTCGACCCCGTGAATTACAGCGGCACCCAT CACATCGGTAAAACCGGCATCGAACGCTTCTATGAGGCTGAACTGCACGGTCAGGTAGGTTACGAAGAAGTCGAGACCAACGCCCGTGGCCGGGTGTTGC GTGTGCTCAAGCGCACGGACCCGATCCCCGGCAAGGACATCGTGCTCAGCCTCGACATCAAATTGCAGGAAGCCGCCGAAGAAGCGCTGGCCGGGCGCCG TGGCGCAGTGGTGGCGTTGAATCCGAATACTGGCGAAGTACTGGCGATGGTCAGTCAGCCGAGCTTCGACCCCAACCTGTTTGTCACCGGCATCAGCTTC AAGGCGTATGCCGAGTTACGCGACTCGATCGACCGCCCGCTGTTCAACCGCATTCTGCGCGGCCTTTACCCGCCGGGCTCGACCATCAAGCCCGCGGTGG CGATTGCCGGGCTCGACAGCGGCGTGATCACCGGTTCATCGCGGGTCTACGACCCCGGCTACTACATGCTGCCCAATTACGACCACAAGTACCGTAACTG GAACCGCAGCGGTGATGGCTATGTGGATTTGGACACGGCGATCATGCGTTCCAACGACACTTACTTTTATGACCTGGCTCACAAACTGGGCATTGATCGT CTGTCCTCGTACATGAACCAGTTCGGCATCGGCCAGAAAGTCTCGCTCGACATGTTCGAGGAGTCCGCAGGCTTGATGCCGTCCCGCGAGTGGAAGCGGG CGACGCGGCGGCAGGCCTGGTTTCCGGGCGAAACCCTGATTCTGGGGATTGGTCAGGGCTACATGCAGTCCACGCCGTTGCAACTGGCGCAAGCGACTGC GCTGATTGCCAGCAAAGGCAAATGGATCCGTCCGCACCTGGCCAAGACCATCGAGGGTGTGCCACCCGTTGATCCGAACCCGATGCCGGACATCGTGCTG CGCGACCCGTCCAACTGGGCCAAGGTCACCCACGGCATGCAGCAAGTGGTGCATGGCGCCCGCGGGACAGCCCGTGTGGCGGGCGTGGGGGCGCAATACC TGATCGCTGGCAAAAGTGGTACGGCGCAGGTGGTGGCGATCAAGCAGGGCGAAAAATATGACCGTTCCAAAGTTCAGGAACGCCACCGCGACCACGCGTT GTTCGTTGGTTTCGCCCCGGCCGACAACCCGCAAATTGCGGTCTCGGTCATGATTGAAAACGGTGAGGCGGGCAGCCGCGTGGCTTCGCCGGTCGTGCGC AAGGTCATGGATGCCTGGTTGCTGGATGCACAAGGCAAGCTCAAACCTGAGTACGCCAGCCCTTCAAAGGCGGAGGTTACGGCCCGTGATGAGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TTTTGATCGCATGCTCTCCAGTGAGGATGTGATGCGTCGACGTGCCTCGCTGTTGCAGCGTTTGCACATCGATGGCCCGCTGCTGATTTTGCTGTTGACC CTGGCGGCTGGCAGTCTGTTCGTTCTGTACTCGGCCAGCGGCAAGAGCTGGGACCTGCTGAGCAAGCAGGCCACCTCGTTTGGTATCGGTCTGGTGTCAA TGTTCATCATTGCCCAGCTTGAACCCCGGTTCATGGCGCGCTGGGTGCCGATTGGTTACCTGATCGGCGTGCTGCTGCTGGTGGTCGTGGACGTCATGGG CCACAACGCCATGGGGGCCACGCGCTGGATCAACATCCCGGGGGTGATCCGTTTCCAGCCTTCGGAATTCATGAAGATTCTGATGCCAGCGACCATCGCC TGGTACCTCTCCAAGCGCACCTTGCCCCCGCAGCTCAAACACGTGGCGATCAGCCTCATGCTGATTGGCGTGCCCTTTGCGCTGATTGTGCGTCAGCCCG
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| Amino Acid Sequence |
>penicillin-binding protein 2
MSQPIRLKDHEKDARLVRSRVVVGAIVVVALICALIARLYYLQVVQYEYHSTLSENNRVHVQPIPPTRGLIFDRNGVVIADNRPSFSLSMTRERSGDWQQ VLDVIVEVLQLTPEDRALFEKRMRQGRRPFEPVPILFELTEEQIARIAVNQFRLPGVEVVAQLVRHYPQGAHFAHSVGYMGRINEKELKTLDPVNYSGTH HIGKTGIERFYEAELHGQVGYEEVETNARGRVLRVLKRTDPIPGKDIVLSLDIKLQEAAEEALAGRRGAVVALNPNTGEVLAMVSQPSFDPNLFVTGISF KAYAELRDSIDRPLFNRILRGLYPPGSTIKPAVAIAGLDSGVITGSSRVYDPGYYMLPNYDHKYRNWNRSGDGYVDLDTAIMRSNDTYFYDLAHKLGIDR LSSYMNQFGIGQKVSLDMFEESAGLMPSREWKRATRRQAWFPGETLILGIGQGYMQSTPLQLAQATALIASKGKWIRPHLAKTIEGVPPVDPNPMPDIVL RDPSNWAKVTHGMQQVVHGARGTARVAGVGAQYLIAGKSGTAQVVAIKQGEKYDRSKVQERHRDHALFVGFAPADNPQIAVSVMIENGEAGSRVASPVVR KVMDAWLLDAQGKLKPEYASPSKAEVTARDE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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