Strain | Pseudomonas lundensis strain DSM 6252 27_73171_34.5992, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GGGCCTTGCGCCAGCCCCGGCTGACCTTGCGCTGGCACGGCTTGCTGCTCGACGCGCCGGTGGTGGGCGGCGTACTGCGGGCCATGGAAGCGGCGCGTTT TGCCAGCACCCTGTCGATCCTGGGCAAAAGTGCCGTGCCGCTGGTGGATGCGCTGGAAATCTCGGCCACGGTCATCGCCAACCTGGCGATCCGCCAACGC CTGCACGAGGTCGCCCGTTCGGTGCGCGAAGGCGGGACCCTGGCCCGGGGCCTGGAACGCAGCGGCGATATCCCGCCCATGATGCTGCACCTGATTGCCA GCGGCGAACGCGCCGGTGAGCTTGACAACATGCTGGCCCGGGCCGCCGAGCAACAGGAAAAAACCCTCGCCGCCCGCATCGCCCTGGTGGTGAGCCTGTT CGAACCCATCATGCTGGTGCTCATGGGCGGCGTCGTTTTATTGATCGTGATGGCCATCCTCCTGCCCATTCTTAGCCTCAATCAACTGGTGAATTGACTG
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DNA Sequence for Gene |
>TU74_RS18670
ATGAATACCTCCTCGAAATCGACCCAACGCGGCTTCACCCTGATCGAAATCATGGTGGTCGTGGTCATCATCGGCGTGCTCGGCGCCATTGTGGTGCCGC AATTCATGAGCCGCCCGGATCAGGCCAAAGTCACGGCCGCACGCACGGACATTCAGGCCATTTCCACGGCGCTGGAAATGTACCGCCTGGACACCTTCAA CTACCCCTCCACCCAGCAAGGCCTCGACGCGTTGAGCACACGTCCGTCCGGTACGCCGGTGGCGAAAAACTGGAACCCTCAGGGTTACCTGAAAAGCCTG CCGCTCGACCCTTGGGGCACGCCCTATCAGTATTCCAACCCCGGCACCCATTCGGCCGGTTACGACCTGTTTTCCTTCGGCGCCGATGGCGTGGCCGGGG GCGAGGGCTATGCAGCCGACATCGGTAACTGGAGCGAGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCCATGCGGCGCGCGGTGGCAGGGTTTACCTTGATCGAAATGATGGTGGTCATTGTGCTGATCGGCGTGATGGCGTCGATGGTGCGCATCAGTCAGGGCG ACAACCACGCGCGGCTGGCGCGTCAGGAGGCTGACGTGCTGCTGAACCTGATGCACGGCCTGCGTGAAAAAGCCGTGCTCGAAGGGCTCGAATTCGGCTT GCGGCTGGAGCCGACGGCCTACCAACTGATGGGCTTCACGCAGGACCAATGGCAGCCCTTGCAACCTGCCGTGCCACTGCCCGACGGGCTGCAACTGGCC TTGACCCTCGAAGGCCAGTCTCACCCGCTCCACGACAGCGCCCACCGGCCACAGTTGATATGGCTGAGCAGCGACGAAAACACCGCCTTTGATCTGCACC TTGAGAGCCCGCCGGTGCGCTGGCGCAGCATCGTCAGCGACGGTCTGAACGACGCGCGCATCGACGACAACGGCTCACCACCATGAAGGCTGAAAAAGGC
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Amino Acid Sequence |
>secretion system protein G
MNTSSKSTQRGFTLIEIMVVVVIIGVLGAIVVPQFMSRPDQAKVTAARTDIQAISTALEMYRLDTFNYPSTQQGLDALSTRPSGTPVAKNWNPQGYLKSL PLDPWGTPYQYSNPGTHSAGYDLFSFGADGVAGGEGYAADIGNWSE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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