Pseudomonas lundensis DSM 6252, TU74_RS17540
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas lundensis strain DSM 6252 24_85338_31.817, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GCTGACTAGGCTCAAAGCGGACCAGCGCATGGCTACGTATCCTGTTTTTAAATCGGAAGGTTTGCAGCTTGGCCGAGCGCGAAACAGATTGCCAGCCTCG TGTCACTGCACCCGGGCTTGACCTTGCCATGATGGCAAGGTGGACACTCTGAACCTCACTAACCAAGGAGTGAACACAATGCACGTTTTTAAAGTTGACG GTATGACCTGTGGCGGATGCGTGGGCTCGGTAACTCGGGCGCTCATAAAGGCAGACGAAGACGCAAAAGTTGAAGTGGACTTGCAGAGCAAAACCGTGAA AGTGGAAAGCAAATTGCCTGCACTGGAAATCATCGATGTCATTACCACGGCGGGTTTTGACGCGCGTACGGCCCATTAACGCATTGTCGGGTTGTGCCTC ATCAGGGGTTTATTAGCTAGCTCGCTATCTTTATGTTCAAGATCCGTCAGCACAGCTAGACTACCGGGTCGCGCTGACACTCGTCCGACCTGGATCCCTG
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| DNA Sequence for Gene |
>TU74_RS17540
ATGAACTTTAGAACCATTTTGATTCTCGGAGCTTTGAGCGCCTTCGGTCCCTTGGCCATCGATTTTTACTTGCCGGGTTTCCCGGCGATGGCCCAGGCAT TTGCGACCGATGAAAAACACATTCAACTTACGCTGGCGGTTTACTTTCTGGGCCTGTCGATCGGTCAGTTGGTCTACGGTCCCATTGCTGACCGCTTCGG TCGGCGCGTGCCTTTGTTGGTGGGCGTCGGGTTGTTCACGGCGGCGTCGTTTGCCTGTGCCTTTGCGCCCTCGCTTGACTGGCTAATCGGGGCGCGTTTC GTTCAAGCCCTCGGCGGTTGTGCGGGGATGGTGCTGTCGCGGGCGATTGTCAGTGACAAGTGCGATGCCGTGGGCTCGGCCAAGGTGTTTTCGCAACTGA TGCTGGTCATGGGGCTGGCGCCCATCCTGGCCCCGATGCTCGGTGGCCTGCTGGTCAATCTGTACGGCTGGCAGGCGATTTTCATTGTCCTGACGTGCTT CAGCGCCCTGGCGGCGTTGGCCGTGGCGCTGGGCTTGCCGGAAAGTTTACCGGCCAATGTGCCACGTCAACCGTTGTCCGGTGCGTTGCGCCAGTACGGC CGCTTGCTCAAGGATCGTGAATACCTGGGGCATGCGCTGACCGGCGGGATCGCCATGGCCGGGATGTTCGCCTACATCGCGGGTTCGCCGTTTGTCTTCA TCCAGTTGTATGGCGTCCCCGCCGAGCATTACGGCTGGCTGTTCGGCAGCAATGCGGCAGGTTTCATTCTCGTGGCTCAGGTTAACGCGCGGTTACTGGC CAAGCGTGGCCCGGCCTTTTTGCTGTCGCGCATGGTGTGGCTGTACCTGGCCGCCGGTTTGACGCTGTTGGGCATCAGCGCCTTGCACACGGAACAACTG TGGCCGCTGTTGATCCCGCTGTTTATTTGCATCGCCAGCCTGGGGTGCATCATTCCCAATGCTTCGGCCTGCGCCATGAGCGGGCAGGGCGCACGGGCGG GTAGCGCCTCGGCGTTGCTCGGCTGTCTGCAGTTCAGCGTGGCGGCCGCGGCGGCGTGGCTGGTGGGGGTATTGCACGATGGCAGCGCCATGCCGATGGC CATGGTCATCAGCTTGTGCGGGATTTTGGCGGTGTCGATCGCGGTGGCAACCCGGCGGCTGTACACCGCGCGGATTGCCGCTCAAACCTCGATTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TTCAGCCCGCCATTCGCTCAGGCAATCTGTGCGGGGCTTGCAAGCGTGTGCGCAGCGTGTCCACAAAGGCTCTGGCCTCCGATTCGCTGCGAAAGTTGAT GGCTTGCTGGTCGATTTGAACCTGCCACTGGCAGTCGCGGGATCTTGCTAACGCTTTTATCAGGATTTTCATTTCTGGCCTCCTCAGGTTCGCAAAGGAG GCCAGTGTATGCCCGATAACGCTGAGAAATATGACGGACATCAAGTCTCTGACTGACGGTTACACAATGGCCGGATCAGTCTCGTCAGGCGTTTCTCAAA ACCCTTCCAGCACAATTTTGCCCTTGGACTTTCCGCTTTCCAGCAGCGCGTGGGCGCGGCGCAGGTTAGACGCGTTGATGGTGCCGAAATGTTCGCCCAC GGTGGTGCGCAGGGTGCCCGCGTCTATCAGTTCTGCGACCCGGTTCAGCAAGTGATGCTGTTCAATCATGTCCGGGGTTTCGAACAGCGACCGGGTGTAC
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| Amino Acid Sequence |
>major facilitator transporter
MNFRTILILGALSAFGPLAIDFYLPGFPAMAQAFATDEKHIQLTLAVYFLGLSIGQLVYGPIADRFGRRVPLLVGVGLFTAASFACAFAPSLDWLIGARF VQALGGCAGMVLSRAIVSDKCDAVGSAKVFSQLMLVMGLAPILAPMLGGLLVNLYGWQAIFIVLTCFSALAALAVALGLPESLPANVPRQPLSGALRQYG RLLKDREYLGHALTGGIAMAGMFAYIAGSPFVFIQLYGVPAEHYGWLFGSNAAGFILVAQVNARLLAKRGPAFLLSRMVWLYLAAGLTLLGISALHTEQL WPLLIPLFICIASLGCIIPNASACAMSGQGARAGSASALLGCLQFSVAAAAAWLVGVLHDGSAMPMAMVISLCGILAVSIAVATRRLYTARIAAQTSI
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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