Pseudomonas lundensis DSM 6252, TU74_RS16305 (carB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas lundensis strain DSM 6252 21_97605_30.5408, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CAATCAAAGCCATCCAGCAAGTGCTGACAACCGAAATTCCAGTATTCGGCATCTGTCTTGGTCATCAACTGTTGGCGCTGGCCTCCGGTGCCAAGACGGT GAAGATGGGTCATGGCCACCATGGTGCTAACCACCCGGTGCAGGATCTGGACACGGGCGTTGTGATGATCACCAGTCAGAACCACGGTTTTGCAGTGGAT GAAGCGACGTTGCCTGCCAACGTGCGTGCGATCCACAAGTCGCTGTTTGACGGCACGCTGCAGGGCATCGAGCTGACCGACAAGAGCGCATTCAGCTTCC AGGGCCACCCTGAAGCGAGCCCGGGCCCGAACGACGTAGCACCGCTGTTCGACCGTTTCATCAACGAGATGGCCAAGCGCCGCTAATCCTTTTCCCAGAT GAAGTCGTCCAAGGCGGCCCCGAATACCGGCGGCCCTTGGAGGCTTCAGGAAAAAGACTACCGGCTTGCCCACTGACCTGCGGATTTGAGTGACAAACCC
DNA Sequence for Gene
>TU74_RS16305 |carB
ATGCCAAAACGTACAGACATAAAAAGCATTCTGATTCTCGGCGCTGGCCCGATTGTTATCGGCCAGGCGTGTGAGTTCGACTACTCCGGCGCTCAGGCCT GCAAGGCACTGCGTGAAGAGGGTTACCGAGTCATTCTGGTGAACTCCAACCCGGCCACCATCATGACCGACCCGGACATGGCCGATGCCACGTACATCGA GCCTATCAAGTGGCAAACGGTCGCCAAGATCATCGAAAAAGAACGTCCTGATGCCCTGTTGCCTACCATGGGTGGGCAGACGGCGCTGAACTGTGCATTG GACCTGGAGCGCGAAGGCGTTCTGGAGAAATTCAATGTAGAGATGATTGGTGCCAATGCGGACACCATCGACAAGGCTGAGGATCGTTCGCGTTTCGACA AGGCGATGAAGTCGATCGGTCTTGATTGCCCGCGTTCTGGCATTGCTCACAGCATGGAGGAGGCTAACGCCGTTCTCGAGAAGCTTGGCTTCCCGTGCAT CATTCGTCCGTCCTTCACCATGGGCGGCACGGGTGGTGGTATTGCTTATAACCGCGAAGAGTTTGAAGAGATCTGCTCCCGCGGCCTGGATCTATCTCCA ACCAAAGAGCTGCTGATCGACGAGTCGCTGATCGGCTGGAAAGAGTACGAGATGGAAGTTGTCCGCGATAAAAAGGACAACTGCATCATCGTCTGCTCGA TCGAGAACTTCGACCCGATGGGTGTGCACACCGGTGACTCGATCACTGTTGCGCCTGCACAGACCCTGACGGACAAGGAATACCAGATCATGCGTAACGC CTCGCTGGCGGTACTGCGTGAGATCGGCGTCGAAACGGGCGGTTCCAACGTTCAGTTCGGTATTTGCCCGGATACTGGCCGCATGGTCGTCATCGAAATG AATCCGCGCGTGTCCCGTTCGTCCGCGCTGGCCTCCAAAGCCACGGGTTTCCCGATTGCGCGTATCGCTGCCAAGCTGGCGATTGGCTATACCCTTGATG AGCTGCAAAACGAAATCACGGGTGGCAAGACGCCAGCCTCTTTCGAGCCTTCTATCGACTACGTCGTGACCAAAATGCCTCGCTTCGCCTTCGAGAAGTT CTCCAAGGCTGATGCACGACTGACCACGCAAATGAAGTCTGTTGGCGAGGTTATGGCCATTGGCCGGACTTTCCAGGAGTCTCTGCAAAAGGCGTTGCGT GGCCTTGAAGTCGGTGTGTGCGGTCTGGATGAAAAACTGGACCTGAGCAACCCGGAAAGCATGGCCGTGCTCAAGCGCGAGCTGACAGTGCCGGGCGCTG AGCGCATCTGGTACGTAGCTGACGCATTCCGTGCAGGCATGACGGTCGAAGACATCTTTGGCATGAACATGATTGATCCTTGGTTCCTGGTGCAGATCGA AGACCTGATCAAGGACGAAGAGAAAATTAAGACGCTGGGTCTTGCCAGCATCGACCGCGACATGATGTATCGCCTCAAGCGCAAGGGTTTTTCGGATCAG CGTCTGGCCAAGCTGCTGGGGGTTACCGAGAAAAACCTGCGTCGCCATCGCCACAAGCTGGAAGTGTTCCCGGTTTATAAGCGTGTTGATACCTGTGCAG CCGAGTTCGCCACCGACACCGCCTACATGTACTCGACCTATGAGGAAGAGTGTGAAGCGAATCCTTCGGATCGCGACAAAATCATCATTCTGGGTGGCGG TCCGAACCGTATTGGTCAAGGTATCGAGTTTGACTACTGCTGCGTACACGCGGCTCTCGCGTTGCGTGCTGATGGTTACGAAACCATCATGGTCAACTGC AACCCGGAAACAGTTTCGACGGACTACGACACTTCGGATCGTCTGTATTTCGAGTCTGTCACTCTGGAAGACGTTCTGGAAATCGTACGGGTCGAGAAGC CAAAAGGTGTGATTGTTCAGTACGGCGGTCAGACGCCACTGAAGCTGGCGCGTGCACTTGAAGAAGCTGGCGTGCCGATCATTGGCACCAGCCCGGATGC AATCGACCGTGCTGAAGACCGTGAGCGCTTCCAGCAAATGGTCGAGCGTTTGAACCTGCGTCAGCCGCCAAACGCAACCGTGCGCAGTGAAGATGAAGCC ATCCGCGCGGCCAGCAAAATCGGTTACCCGCTGGTGGTTCGTCCTTCCTACGTGCTGGGCGGCCGTGCGATGGAAATCGTGTACGAAGAGGAAGAACTCA AGCGCTACCTGCGTGACGCGGTGAAGGTGTCTAACGACAGCCCGGTTCTGCTGGATCACTTCCTGAACTGTGCCATCGAGATGGATGTTGACGCGGTTTG TGACGGTACGGATGTCGTGATCGGCGCGATCATGCAGCACATTGAGCAGGCAGGCGTTCACTCGGGCGACTCCGCTTGCTCGTTGCCTCCTTACTCGCTG CCACTGCACATCCAGGACGAGATGCGCGAACAGGTCAAGAAGATGGCGCTGGAGTTGGGTGTTGTCGGCCTGATGAACGTTCAACTGGCACTGCAAGGGG AAGACATCTACGTAATTGAAGTGAACCCGCGCGCTTCGCGCACCGTTCCTTTTGTCTCCAAGTGCATTGGTGTCTCACTGGCAATGATTGCTGCGCGCGT CATGGCAGGTAAAACCCTGAAGGAAATCGGTTTCACCAAAGAAATCATTCCTAACTTCTACAGTGTGAAAGAAGCGGTGTTCCCGTTCGCCAAATTCCCG GGTGTTGACCCGATCCTTGGTCCTGAGATGAAGTCCACCGGTGAAGTGATGGGGGTAGGTGATACCTTCGGTGAGGCATTTGCGAAGGCTCAAATGGGCG CGAGCGAAGTATTGCCAACTGGCGGCACCGCCTTTATCAGTGTGCGTGATGACGACAAGCCTTTGGTGGCAGGTGTTGCGCGTGACCTGATCGCTTTGGG CTTCGAGGTGGTTTCCACAGCGGGCACGGCCAAGTTTATTGAAGCGGCAGGATTGAAGGTACGCCGTGTCAACAAGGTGACCGAAGGTCGCCCTCACGTT GTCGATATGATCAAAAATGACGAAGTCACGCTGATTATCAACACAACTGAAGGTCGTCAGTCGATTGCTGACTCTTATTCCATTCGTCGTAACGCCTTGC AGCACAAGATTTATTGCACCACGACCATTGCTGCTGGCGAAGCGATCTGTGAAGCGCTTAAATTCGGCCCTGAAAAAACCGTACGTCGCTTGCAGGATCT ACACGCAGGATTGAAGGCATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCATAACCAAATACCCAATGACGGTTCAGGGCGCCAAAGCCCTCGAAGAAGAGCATGCGCACCTGACGAAGGTTGTTCGGCCCAAGTTGAGCCAGGACAT TGGCACGGCACGGGAGCTGGGTGACCTGAAGGAAAACGCTGAATATCATGCAGCTCGTGAACAGCAAGGCATGGTGGAAGCGCGCATTCGTGATATCGAA GGCCGCATGCAGAACGCAGTCATTATCGATGTGACGACCATCCCCCATACCGGAAAGGTGATTTTCGGTACGACGGTAGAGATCGCTAACGTTGAAACTG ATGAAAGCGTGACCTACCAGATCGTTGGTGAGGATGAGGCTGATTTCAAGCTCGGAAAAATCTCTGTCGGGTCCCCGCTTGCTCGTGCCTTGATCGCCAA GGAAGAGGGCGATGTGGTGGCTGTGAAGACGCCAAGCGGTGTGATCGAGTACGAGATTGTTGAAGTTCGCCACATCTGAACACAGGCGCCCGCTTCGAGC
Amino Acid Sequence
>carbamoyl phosphate synthase large subunit
MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPDMADATYIEPIKWQTVAKIIEKERPDALLPTMGGQTALNCAL DLEREGVLEKFNVEMIGANADTIDKAEDRSRFDKAMKSIGLDCPRSGIAHSMEEANAVLEKLGFPCIIRPSFTMGGTGGGIAYNREEFEEICSRGLDLSP TKELLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDPMGVHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVETGGSNVQFGICPDTGRMVVIEM NPRVSRSSALASKATGFPIARIAAKLAIGYTLDELQNEITGGKTPASFEPSIDYVVTKMPRFAFEKFSKADARLTTQMKSVGEVMAIGRTFQESLQKALR GLEVGVCGLDEKLDLSNPESMAVLKRELTVPGAERIWYVADAFRAGMTVEDIFGMNMIDPWFLVQIEDLIKDEEKIKTLGLASIDRDMMYRLKRKGFSDQ RLAKLLGVTEKNLRRHRHKLEVFPVYKRVDTCAAEFATDTAYMYSTYEEECEANPSDRDKIIILGGGPNRIGQGIEFDYCCVHAALALRADGYETIMVNC NPETVSTDYDTSDRLYFESVTLEDVLEIVRVEKPKGVIVQYGGQTPLKLARALEEAGVPIIGTSPDAIDRAEDRERFQQMVERLNLRQPPNATVRSEDEA IRAASKIGYPLVVRPSYVLGGRAMEIVYEEEELKRYLRDAVKVSNDSPVLLDHFLNCAIEMDVDAVCDGTDVVIGAIMQHIEQAGVHSGDSACSLPPYSL PLHIQDEMREQVKKMALELGVVGLMNVQLALQGEDIYVIEVNPRASRTVPFVSKCIGVSLAMIAARVMAGKTLKEIGFTKEIIPNFYSVKEAVFPFAKFP GVDPILGPEMKSTGEVMGVGDTFGEAFAKAQMGASEVLPTGGTAFISVRDDDKPLVAGVARDLIALGFEVVSTAGTAKFIEAAGLKVRRVNKVTEGRPHV VDMIKNDEVTLIINTTEGRQSIADSYSIRRNALQHKIYCTTTIAAGEAICEALKFGPEKTVRRLQDLHAGLKA
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site