Pseudomonas lundensis DSM 6252, TU74_RS01360
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas lundensis strain DSM 6252 1_393880_30.2954, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GCGGCACTGTATGAAAGCTGGTCGATTCCGATTGCGGTCATGCTGGTGGTGCCTCTGGGGATTATCGGTGCACTGCTGGCCACTAGCCTGCGGGGGCTGT CCAACGACGTGTACTTCCAGGTGGGCTTGCTGACGACCATCGGTCTGGCCTCGAAAAACGCCATCCTGATCGTCGAGTTCGCCAAAGAGCTGCACGAACA AGGGCGAACCTTGACCGAAGCCGCCATTGAAGCCTGCCGCATGCGTCTGCGCCCGATCATCATGACCTCGCTGGCGTTCGTACTGGGCGTTATCCCGCTG GCCATTTCTTCGGGCGCAGGTTCGGGTAGCCAGCACGCCATTGGTACAGGTGTGATCGGCGGTATGATCACTGCAACTGTTCTGGCCGTGTTCTGGGTGC CGCTGTTCTTCGTCGCGGTGTCGTCCTTCGGCAGCGGCAAGGACAACGACCCGGAAAAGAAAGTGGACCTGACTAAAACTCCAAATCAAGAGGCTGGCCA
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| DNA Sequence for Gene |
>TU74_RS01360
ATGAGCAAGTCGCTTCTCGCAGTCGCCGTAGCAGCGTTTACGCTGGGCGGCTGCTCGCTGATCCCTGACTACCAGCGCCCTGAAGCCCCGGTAGCAGCGC AGTACCCGCAAGGCCCGGCCTACAAGCCTAACGAAGCGCCGGCTCAAGCGGCGGCAGAACAAGGCTGGCGTGAGTTTTTCCGCGACCCGGCCCTGCAACA GTTGATTCAGACAGCTCTGGTGAACAACCGCGACCTTAGGGTCGCGGCCCTGAACATTGATGCGTATGCCGCGCAGTACCGTATTCAACGTGCCGATCTG TTCCCGGCAGTGACGGCCAATGCCAGCGGCAGCCGTCAACGGATGCCAGCACGCCTGTCGCAAACGGGCGAGTCAGGCATCACCAGCCAATATTCGGCGA CCCTCGGGGTCAGCGCGTACGAGCTGGATCTGTTTGGCCGCGTTCGCAGCCTGAGCGATCAGGCCTTGCAGAACTACTTTGCGACCGAAGAAGCCCGACG CACCACTCAGATCAGTCTGGTTGCCAGCGTCGCCAATGCTTACTTGACCTGGCAAGCCGACAAAGAGCTGCTCAAGCTGACTGAAGACACGCTCAAGGCG TTCGATGAGAGCTACAAGCTCACCTTGCGCAGCAATGAGGTGGGCGTTGCTTCGGCGCTGGAAGTCAGCCAGTCGCGGACCTCGGTGGAAAACGCCAAGG TTCAACTGGCCCGCTACACGCGCCAAGTGGCTCAGGATCAGAACAGCCTGGCCTTGCTACTCGGCACGAGCATTCCGCAGAACCTGCCCGCAAGCAAACC GCTCGCTGCTGATCTGCTGACCGAAGTACCGGCAGGCCTGCCTTCAGATTTGTTGCAACGCCGTCCTGACATTCTGGAAGCCGAGCACAAGTTGCTGGCC GCCAATGCCAATATCGGCGCCGCACGTGCCGCGTTCTTCCCGAGCATCAGCCTCACCGCCAATGCCGGGACCTTGAGCCCGGACCTGTCGGGGCTGTTCA AGGGAGGCTCGGGCACTTGGCTCTTCTCGCCGCAAATCAACCTGCCCATCTTTAACGCAGGGGCTTTGCGCGCCAGCCTGGACTACTCGAAAATCCAGAA GGACATCACCGTCTCGCAGTATGAGAAGGCGATCCAGACAGCATTCCAGGAAGTATCTGACGGCCTGGCAGCGCGCCAGACCTACAATCAACAGTTGCAA GCCCAGACGGACTTCGTTAACGCCAACCAGGATTACTACCGGTTAGCCGAGCGTCGTTATCGGATTGGTGTCGACAGCAACCTGACGTTCCTTGATGCAC AACGCTCCCTGTTCAGCGCGCAACAATCGTTGATCAGTGACCGCCTTTCGCAGCTGACCAGTGAAGTCAATTTGTACAAGGCGCTGGGTGGCGGCTGGTA CGAACAGACCGGGCAAAACCGCCCGATCTCGTCCGAGCCGCCGAAGGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TAGAGAAACTGCTAAACACACAAACCCGCCTTTTGGCGGGTTTGTGTGTTCAAGGGCGGTGAATTTACCTAAACGCGCTGAGCATTTTCTCCCCTGACGT GCCTTGCCCGTAGATCACTCCAGTGGGCGTGAAAATGAAATACATGGCTTAAAGTCCTGACTGCCTTATTAATGGATATCAGATCCCGACCCAACATGCT GCTTTGCGCAACGATGCTTAGCCCTTATGGCAACCGTAGGATATGCAAACTTGATAGTCGCCGCTGCGGTTCAGCACTGTATAAGCGGCCCTGAAAGATT GATCCGCCTCAGTTGCCTGGCCATTTAACTACCTGACTGAACGCGCAGGGTGATTTCACCCATCGCTCTTTGCGCACGTGCAACCCGTACCGTGTGGATA TAGAACGCGCGTTCTATATCCACACTTCACTTATCCAAGAACACCCCCTCCTCAGAAGTTATTGGCTCCTGAAAGACGCTCATTGATTAATCATTCAATA
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| Amino Acid Sequence |
>multidrug transporter
MSKSLLAVAVAAFTLGGCSLIPDYQRPEAPVAAQYPQGPAYKPNEAPAQAAAEQGWREFFRDPALQQLIQTALVNNRDLRVAALNIDAYAAQYRIQRADL FPAVTANASGSRQRMPARLSQTGESGITSQYSATLGVSAYELDLFGRVRSLSDQALQNYFATEEARRTTQISLVASVANAYLTWQADKELLKLTEDTLKA FDESYKLTLRSNEVGVASALEVSQSRTSVENAKVQLARYTRQVAQDQNSLALLLGTSIPQNLPASKPLAADLLTEVPAGLPSDLLQRRPDILEAEHKLLA ANANIGAARAAFFPSISLTANAGTLSPDLSGLFKGGSGTWLFSPQINLPIFNAGALRASLDYSKIQKDITVSQYEKAIQTAFQEVSDGLAARQTYNQQLQ AQTDFVNANQDYYRLAERRYRIGVDSNLTFLDAQRSLFSAQQSLISDRLSQLTSEVNLYKALGGGWYEQTGQNRPISSEPPKA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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