Pseudomonas lundensis DSM 6252, TU74_RS15260
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas lundensis strain DSM 6252 18_105475_33.3021, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CTGTTGTGGGTGTTGCTGATTTATTTCGGCAGCGTGAATGCCGTGCGCGCGCTGGGCGAGTTCCTCGGCATGCCCGACCTGACCCTCAGCGCGTTCGCGG CGGGTGTCATCGCGCTGGGCTTGTGCTTTGGCGCGTACGCCACTGAAGTGTTTCGCGGCGCCATTCTGGCCATCCCCAAAGGCCATCGCGAAGCGGGCCT GGCGCTGGGCCTGACCAAGCCACGGATTTTCACCCGGCTGGTATTGCCGCAAATGTGGCGGATCGCCCTGCCCGGTCTGGGCAACCTGTTCATGATCCTG ATGAAAGACACCGCGCTGGTGTCGGTGATCGGTCTGGAAGAAATCATGCGTCAGGCACAAAACGCCGTGACCTTCGCCAAACACCCGTTCACCTTCTACA TGGTGGCCGCCGTGATGTACCTGGGCCTGACCGTGCTGGCCATGGGCACCCTGCATGTGCTTGAAAAACGCGCAGCGCGCGGCTTTGTGAGGAGAACGTA
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| DNA Sequence for Gene |
>TU74_RS15260
ATGGTCTGGGAACTCTTCATCAAGTGGCTGCCCAAGCTGATTCAGGGCGCAACCCTGACCCTCGAACTGACCGCGCTGTCGGTGATCGCCGGCCTGATCG TCGCCATCCCGTTGGGCATCGCCCGTTCGTCCCGGCTGTGGTACGTGCGCTCGCTGCCGTATGCGTACATCTTTTTCTTCCGCGGCACGCCGCTGTTGAT CCAGTTGTTTCTGGTGTATTACGGCCTCGGGCAGTTTGAAGCGGTGCGCGACAGCGTGTTGTGGCCGTACCTGCGCAGCCCGTTCTGGTGCGCGGTCATC ACCATGACCCTGCACACGGCAGCGTACATTGCCGAGATCCTGCGGGGCGCCATTCAGGCCATCCCGCCGGGTGAAATCGAAGCCGCGCGGGCGCTGGGCA TGTCGCGCTTCAAGACCCTGATCCACATTGTGCTGCCGCGTGCTGCGCGCATCGGCCTGCCCGCGTACAGCAATGAAGTGATCCTGATGCTCAAGGCCAG TTCGCTGGCGAGTACCGTGACCCTGCTGGAACTGACCGGCATGACCCGCACCATCATTGCCCGCACGTACCAGACGGTGGACATGTTCCTGATTGCCGGT GTCATTTATCTGGTCATGTCGTTTGTGCTGATTCAGGGCTTCAAGCTGCTGGAGCGCTGGTTGCGCGTCGATGCCTGCCAGGGCCGATAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGCCGACGTGTTGCGGGGAGCGTCATTGCTCACCCGCTTCCAGGCGCTGGACCGCTGGCTCAACCAGCATCAACACCTGTGGCGCCCGCGGCCATTCACG CAGTTGACTATGCCGTGGGAAGCGCAACACCCCGAACTGGCGCAGTGGTTGCGCCAGCGTTCGTTACAGGACGCCGAAGACAGCCACAACCAACCGCATC ATCTGCCCGCCCCTGCACCGTTTCCGGCGCTGGCGGCGATGTCGCGTGCCTTGAGCGCCGTGTCGGCCTTGCCGACGCAAGGGTTCATGCCGGCGCTACC GCGTTTGCAAGTCGACGTGCCGGGGCGTAAATGGCAGCAGATCGACGCCTTCGCTCAGTGCCTGACGTTTCAGACCCCGCCCACTCATTGGCTGGACTGG TGCGCGGGCAAAGGCCATTTGGGGCGCCGCCTGCTCAGCTCCGGGCAGCGATTGACGTGCCTGGAATACGACCCGGCGCTGATTGAATCCGGTCAATTGC
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| Amino Acid Sequence |
>ABC transporter permease
MVWELFIKWLPKLIQGATLTLELTALSVIAGLIVAIPLGIARSSRLWYVRSLPYAYIFFFRGTPLLIQLFLVYYGLGQFEAVRDSVLWPYLRSPFWCAVI TMTLHTAAYIAEILRGAIQAIPPGEIEAARALGMSRFKTLIHIVLPRAARIGLPAYSNEVILMLKASSLASTVTLLELTGMTRTIIARTYQTVDMFLIAG VIYLVMSFVLIQGFKLLERWLRVDACQGR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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