Pseudomonas lundensis DSM 6252, TU74_RS12410
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas lundensis strain DSM 6252 13_139274_32.0348, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TTCGAACTGGCCAACAGTCAGCTGCGTGCGCCTGCGTCGGGCATTGTGGTGGGGCTGGACGTGTTCACCGAAGGTGGCGTTATCAAGCCCGGTCAGGCGT TGATGGAAATCGTCCCGCAAGGCGAGCCCTTGCTGGTGGAGGCGCGCGTGCCCGTCGAACTGGCTGACAAGGTGCATGCAGGGTTGCCGGTTGAACTGAT GTTCTCGGCTTTCAGCCAGAGCACCACGCCCCGGGTGGCGGGTGAGGTGACGCTGGTGTCGGCGGATCGCCAGGTGGATCAACGTACTGACGAACCGTAT TACACACTTCGTGCCCAAGTCAGCGAAGCCGGGCTCAAGCAACTGGCCGGTTTGCAGATCCGTCCGGGCATGCCGGTGGAAGCGTTCGTGCGCACGGGCG AGCGTTCGCTGCTCAACTACGTGTTCAAGCCCTTGCTCGACCGCACCCACATGGCGCTGGTGGAGGAATGAGCGTGCGCCGACTTTTTTACGCGGTGGTC
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| DNA Sequence for Gene |
>TU74_RS12410
ATGGCCTGCGGCTGTTCGATGCCCTCGGCGCAGGCGTTGGGGTTGCTCCAGGCGTATGACTTGGCCGTGCGTAACGATCCGACGTTTCAGGCGGCGATTG AAGAACGGGCAGCGGGGGAGGAAAACCGCGCCCTGGGTCGCTCCGCGTTATTGCCGACGTTGTCGTGGAACTACAACAACTCGCGTAATGCTTCGCAGGT CACCCAAGCCGACACGCGCACTGACCGTGACTACCGCAGTTATGCGTCGACCCTGACCTTGCAGCAGCCGTTGCTGGACTACGAAGCCTATGCCCGATTC CGACAAGGTGCGGCGCAAGCGTTGTTCGCGGATGAGCGCTTTCGCAGCAAAAGCCAATACCTGTTGGTTCGCGTGCTAAGTGCCTACAGCCAGGCGCTGT TGGCCCGCGAGCACATTGAGTTGAGCCGTGCGCAAAAGCGCGCCTATGCCGAGCGCCTGCAACTGAACCAGCGTTTGCTCAAAGGCGGCGAAGGGACGCG CACCGATGTGCTGGAAACCCGCGCGCGCCTGAGCATGGCCGTGGCGCAAGAAATCGAAGCGCAGGACGATCAGGACGCCGCGTTGCGTGAATTGGAAGCG ATGTTGGGTAAACCGTTGCAGGTTGAAGAGCTCGACCCGCTGGTGGCGCCTTTCACTGTCCCGCCACTGGAGCCTCAACGTTTTGAAAACTGGCGCGAAC TGGCCTTGGCCAATAACCCTGAACTGGCGTCGCAACATCATGCACTGACATCGGCCGAGTACGAAGTGGAGCGCAAGCGGGCCGGTCACCTGCCCACGCT CAGCCTGTATGCCAGCAGTCGGCAGTCCAGCTCCGATTCAGAAAGCACCTATAACCAGAAATACGACACCAACAGCGTAGGCATTCAGCTGCGTGTGCCG TTGTTTGCAGGGGGCTCGGTGTCGGCTTCCACGCGTCAGGCGGCGCGGCAATTGTCTCAGGCGCAGTACGAACTGGACGCACAGACCGCGGCCACGTTGG TTGACCTGCGCAAACAGTTCAACCTTAACAACAGCGCGGCGGCCAAGGTGCGGGCATATGAAATGGCAGTTGACTCCGCCAGTGCCCTGGTGCAAGCGAC GCAAAAAAGCGTACGGGGCGGGGAGCGGGTCAATCTGGACGTATTGGACGCAGAGCAGCAGTTGTTCAGTGCGAAGCGGGATTTGGCGCAGGCGCGTTAC GCTTATTTGCTGGCGCGGGTGCAGCTCAAGTATTACGCCGGACTATTGAATGAAGGGGATTTGCAGCAGATGGCCGGGTATTTTCAACCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
AAACGCCAACCCTTGACGCTGCCTCGCGCCTCGTCGGTGACTACAGGTTGCAAAGTAGTCACCGACGAGGCGCGCAGGGCTGTGGTTTTAGGGGTTACCG GCGAACCAGCAGCACACCCGATTCCATGTGGTGGGTCCACGGGAACTGGTCAAACACCGCGCAACGCTCGATGCGGTGGGTGTCGTGGAGTTGGGCGATG TTCTCGGCCAGGGTCAGCGGGTTGCACGAGATGTACAGAATGTTATCGAAGCGGCGGGTGAGTTCGCAGGTGTCCGGGTCCATGCCGGCACGCGGCGGGT CAACGAATACGCTGCCGAAGTCGTAGCTTTTCAGGTCAATGCCCTGCAAGCGGCGGAACGGACGCACTTCGTTCAGCGCCTCGGTCAATTCTTCAGCCGA CAACCTGACCAGCGTGACGTTATCCACAGCGTTGTCGCGCAGGTTGTTGAGCGCTGCATACACCGAGGTCTTGCTGATTTCAGTGGCCAGGACTTTGCGC
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| Amino Acid Sequence |
>peptidase
MACGCSMPSAQALGLLQAYDLAVRNDPTFQAAIEERAAGEENRALGRSALLPTLSWNYNNSRNASQVTQADTRTDRDYRSYASTLTLQQPLLDYEAYARF RQGAAQALFADERFRSKSQYLLVRVLSAYSQALLAREHIELSRAQKRAYAERLQLNQRLLKGGEGTRTDVLETRARLSMAVAQEIEAQDDQDAALRELEA MLGKPLQVEELDPLVAPFTVPPLEPQRFENWRELALANNPELASQHHALTSAEYEVERKRAGHLPTLSLYASSRQSSSDSESTYNQKYDTNSVGIQLRVP LFAGGSVSASTRQAARQLSQAQYELDAQTAATLVDLRKQFNLNNSAAAKVRAYEMAVDSASALVQATQKSVRGGERVNLDVLDAEQQLFSAKRDLAQARY AYLLARVQLKYYAGLLNEGDLQQMAGYFQP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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