Pseudomonas lini DSM 16768, TU81_RS23840 (ampC)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas lini strain DSM 16768 9_294614_17.035, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TGTTTCGTCTGAAAATCCGCCAGCCGCGGCAACAGCCAGCCGACCGCAAACGTCCCCACCGCCCCCACCGTCAACACCTCGCGAAAATGCCCGCCCTCGA AACGCTCCAGGGTCTCGGCGATCCGGTCGAAGGATTCGCGCAACACCGGCAGCAGGGTTTCACCTTCGCTGGTCAGCATCAGGCCTCGGGGCAGGCGTTT GAACAAAGTCACGTTAAGCTGGGCTTCAAGGCTTTTGACCTGATGACTCACCGCCGCCTGCGTGACACACAACTCCACCGCCGCCCGTGTGAAACTCAGA TGACGTGCCGAAGCCTCGAAAGCGCGCAGCGCATTCAACGGCAGATGTGGTCGAATCATGCCCACCCCCAAAATTTTCTAATGGCTCATCCGAAATATCG TCGTTTGTCGGTCTTCGCCAAACTGCATAGATTTGGCTCGCCCAGCAACGGACCGGCTTAAAAACCGCTCGGAGTGTAGCGGTTAACACCACAGAAACTC
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| DNA Sequence for Gene |
>TU81_RS23840
|ampC
ATGGAAAGTCATTCAATCATGCCTAAAAAGAATCAGAGAAAACTCGCGTCTTACAGCGCTTTCGCACTTCTGCTCGGCGTTAGCCACAGCTTTGCTGACG AGCGCATCGAAGCCATCGTCAAGGCAACCATTGAACCGGTGATGCAGCAACAGCAGATCCCCGGTGTCGCGGTCGCGATTACCGTCAATGGTAAAGCGCA TTACTTTAACTACGGCGTGGCCTCGAAAGAAAACGGCAAAGCCGTCACCGAAAACACCCTGTTCGAGATCGGTTCGGTGAGTAAAACCTTCACCGCCACC CTCGCCGCCTACGCGCAGGCGACAGGCAAACTGACCCTGTCGGACAACGCCAGTCAGGTTCTACCGACATTGCGTGGCAGCGCGTTTGACAGGATCAGCC TGCTGCAACTCGGCACCTACACCGCCGGTGGTTTGCCCCTGCAATTCCCCAGCGATGCAGACCATCAGGACAAAATGCTCGGTTATTTCAAGCAGTGGAA ACCGACCTACACCGCCGGCACTCATCGCCAGTATTCAAACCCCAGCATTGGGTTATTCGGCTATCTGGCAGCGCAAAGCATGGGGGCGCCGTTCGATGAG CTGATGGAAAAAACCTTGCTGCCGAAACTGGGTCTGAAACACAGCTACCTCAAGGTGCCGCAGGATCAGATGGGGCTTTACGCTTGGGGTTACAACAAGG ACAACAAACCTGTGCGGGTCGAACCGGGCGCACTGGATTCTGAAGCGTATGGCGTGAAAACCAGTGCCTCGGACCTGCTTCGCTATGTTGAAGCGAACAT GAATCCGACTTCGCTGGAAAAGCCCTTGCAGCAAGCCATCGCCATCACTCACACCGGTTATTACACCGTCGGCGAGATGACTCAAGGGTTGGGATGGGAG TTCTACAACTATCCGGTGACGCTCGACACATTGCTCGTCGGCAACTCGTCGCAGATGGCGATGGAGGCTCATGCCGTCCAACCGCTGAACCCGCCGCAAC CGCCACACGATAATGTGCTGATCAACAAAACCGGCTCAACCGGCGGCTTCGGCGCCTACGTTGCCTGTATTCCGACGAAGGACATCGGCATCGTGATCCT GGCCAATAAAAACTACCCGAACCCGGAACGAATCAAAATCGCTCACAAAATTTTGAGTGCGCTGACTGAATAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCGAATGACTCGGTCCCGTAGCAACTGCCGAGCCTGCGAGGCTGCGTTCGGCCGCGAAGCGGTCGCCATCCAGCGAATGCGGTTTGCCTGAAAGAATGCG GTGGCAGGTTTTGCGACTGCTTCGCAGCCGAACGCAGCCTCGCAGGCTCGCAGCTGCTACGGATGTTCGGGGGATAAACGAAAAAGGGTCAAGACGCAGA ACCTGTGGGAGCGTGGCTTGCCCGCGAAGAACGATGATGCGCAACACCTGAAAAACTGCGGTGCATTCTTCGCGGGCAAGCCACGCTCCCACAGGATTTT CGTCGCTCAATTTTCTTAACTTACCAGCGAAAATTCAGTCATCCGGCTGCTCAGGCGGTTTGGCGGGTTTCGCCGGTTTGCCCTTTGCACCTTTGGCCGG TGCAACGTCAGCCACCGGCGCTGGCACCGGTACTGTCGCTTCCTTTTCAGCGGCTGGCAGCGCGTCGATGGTGCTGAAAATCTCTTTCAGCTCGACCACA
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| Amino Acid Sequence |
>beta-lactamase/D-alanine carboxypeptidase
MESHSIMPKKNQRKLASYSAFALLLGVSHSFADERIEAIVKATIEPVMQQQQIPGVAVAITVNGKAHYFNYGVASKENGKAVTENTLFEIGSVSKTFTAT LAAYAQATGKLTLSDNASQVLPTLRGSAFDRISLLQLGTYTAGGLPLQFPSDADHQDKMLGYFKQWKPTYTAGTHRQYSNPSIGLFGYLAAQSMGAPFDE LMEKTLLPKLGLKHSYLKVPQDQMGLYAWGYNKDNKPVRVEPGALDSEAYGVKTSASDLLRYVEANMNPTSLEKPLQQAIAITHTGYYTVGEMTQGLGWE FYNYPVTLDTLLVGNSSQMAMEAHAVQPLNPPQPPHDNVLINKTGSTGGFGAYVACIPTKDIGIVILANKNYPNPERIKIAHKILSALTE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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