Pseudomonas lini DSM 16768, TU81_RS22635
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas lini strain DSM 16768 8_312049_22.9628, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
AGCGGTCGGCTACTGGAACATCAGCCCGGAAAGCTTCCTCGACAAGCCAGTGGTGAAGGTCGATGAAAGCGCGATCGACTATTACGCAATCAACGCCCAT AGCGTGCAGTACCTGCCCGACGGCAAACTGCAATACGAAATGACGTCGGACAAGGTCGAACACCTGAAAGCGACCGAGGTGACGTTGCTGACCAACCCCG ACCTGAACATGTTCCGTGGCACCGAATTCCCCTGGCACGTCCAGAGCGAGCGCGGCGAAGTCAACCCGGACGGCACTCAGGTCGAGCTGATTGATTCGGT ACGTATCACGCGTTTCGACGAAAAGAACCGCAAAACCCTGATTACCACCACCCGTATGACAGTGTTCCCGCAGCAGCAATATGCGCAGACCGATCAACCC GTTAGAATCGACGGCGCTGGCGGTGTATCGACAGGCAACGGAATGAAAGCGTACTTGAAAGAAAGCAGGATACACCTGCTATCGAACGTAAGAGGACAGT
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| DNA Sequence for Gene |
>TU81_RS22635
ATGAGGCTCGTTAAAACCCTCCCTATTTTGCTCAGTCTGGGCGCAGCACTGGGAAGCGTGAGCGCCTGGGCTCTGCCGAACGATCAAGAGCAGCCCATCC GCATTCAGGCCGACGATGCCCAACTGGACGACAAGAACGGCGTTGCTACCTATAAAGGCGATGTGATCATTACGCAGGGCTCGATGAAGGTCACCGGCAA TACCGTGACCATCACCCGCACCCCGGCCGGCGACATCGACGTGGTGACCTCGGTGGGCAACCTCGCCTACTTCGAGCAACTGCAAACGGCGGGCGATACC AAGCCGGTTCAGGGCTACGGCGTAACTATTCAGTACCACGCCTCGCAGAACCGCGTCGTGTTGATCGATCGCGCCAAAGTCATCGATAAAGACAACAACG TCACCCAAGGCGAGAAAATCGTCTACGACACCGTCAAAAAGCTTGCGAGCGCCGGTCGTGCCACGGGCAACAAGGTCACCGAGTCGCGCCCTCGCATCGA CATGGTGATCCAGCCGAAGAAGAAAACCGACGAGCAAAAGGCCCAGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TGGCAACTCTGAAAGCTCAGCATCTGGCCAAGAGCTACAAGAGCCGTCAGGTCGTGCGCGACGTCAGCCTGTCCATCGACAGCGGTCAGATCGTCGGCCT GCTTGGCCCTAACGGTGCCGGTAAAACCACCTGCTTCTACATGATTGTCGGCCTGGTACAGGCCGATCAGGGTCGCGTGCTGATCGATGACCTGGACGTC AGCCACCAGCCGATGCACGGTCGTGCGAAGGCGGGTATCGGTTATCTTCCGCAAGAAGCGTCGATCTTCCGCAAACTGTCGGTGGCCGACAACATCATGG CGATCCTCGAGACTCGCAAGGAACTCGACAAGGCCGGTCGTCGCAAAGAGCTGGAAAGCCTGCTGCAGGAATTTCACATCCACCACATCCGCGACAACCT CGGCATGAGCCTGTCCGGTGGTGAACGCCGCCGCGTGGAAATCGCCCGGGCACTGGCCACCAATCCGAAATTCATCCTCCTCGACGAACCCTTCGCCGGC
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| Amino Acid Sequence |
>organic solvent tolerance protein OstA
MRLVKTLPILLSLGAALGSVSAWALPNDQEQPIRIQADDAQLDDKNGVATYKGDVIITQGSMKVTGNTVTITRTPAGDIDVVTSVGNLAYFEQLQTAGDT KPVQGYGVTIQYHASQNRVVLIDRAKVIDKDNNVTQGEKIVYDTVKKLASAGRATGNKVTESRPRIDMVIQPKKKTDEQKAQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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