Pseudomonas lini DSM 16768, TU81_RS14115
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas lini strain DSM 16768 4_731568_20.3369, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CCCGCGCCAGGCCCATGTGCCGATCATCATGCTCACCGCCAGTTCCGACGAGGCCGACCGCGTCATTGGCCTGGAACTGGGCGCCGACGACTACCTTGGC AAACCCTTCAGCCCCCGTGAATTGCAGGCGCGCATCAAAGCCTTGTTGCGCCGCGCGCAGTTCGGTCAGGAGCGTTCCGGCAGCGAAGTGCTGGCTTTCG ACGACTGGCGACTGGACATGGTCAGCCATCGACTGTTCCACATCGACGGCGAGGAAGTGATTCTCTCGGGCGCCGATTTCGCGCTGCTGAAACTGTTCCT CGATCACCCTCAGGAAATCCTCGACCGTGACACCATTGGCAACGCCACCCGTGGCCGTGACCTGATGCCGCTCGATCGCATTGTCGACATGGCGGTCAGC CGTTTGCGCCAGCGCCTGCGCGACACCGAAAAACCGCCACGGCTGATCCGTACCGTGCGCGGCAGTGGTTACCAACTGGCAGCCAACGTGGTTGCCAGCA
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| DNA Sequence for Gene |
>TU81_RS14115
ATGGCCACTGAGTTCCTGCGCAAGCTCGCCGGGCAGGTGCCGGTGCCGCGCTCGCTGCTCGGGCGCATGTTGCTGCTGACCCTGCTGGCGGTGTTATTCG CCCAGGCGCTGTCGAGCGTGATCTGGGTCTCGCAATTGCGCGCCACGCAGCTTGAAGGCCTGGTCACCAGCGCTCGCAGCCTGGCTCATTCGATGACGGC CAGCGTCAGTTATTTCCGCTCGTTGCCGGTGGCGTTTCGACCGCTGGTACTCGATCAATTGCGCAGCATGGGCGGCACCCGATTCGTGGTGACGCTCAAC GACAAACCCTTGGGGATGGAAGTGTTGCCGATCACCCCGCGCAAAGAAGCGGTGCTCAAAGCGGTGGGCGAAGTGTTGCGCGAGTCGCTGGGTCAGGACA TCGACATCTCGGTGACGTTCGTCAGCCCCGAAGACCTGCGGATTTTCAACGGCGGTTTGAAACTCGATGAGTTGCCACGTTCCTGGGCGCATTACGCGTT GACCCTGGAGCCAGTGAACCCGCCGGTGCTGGTCACGCAAATCCAGATGGCACCGGGCGAATGGCTGTACATCGCCTCGCTGTTGCCCGAGCCCTACACC AGTCTTGAAGAGCAAGGCCTGCCGGCGCAGCAGGTCTGGTTCATCGTGCTCACCAGCGGTTTCCTGCTGCTGTTCATCGGCCTGTTAGTGCATTGGCAGA GCCGACCGCTCAAACGATTGGCGCGGGCGGCGCGAGACATGTCTCTGGGTGCGGAAGTCGAACCGGTGGCGGAGGGCGGCGGCAGTGAAGTGGTGGAAGT AGGCCGCGCCTTCAATGCGATGCGCGAGCGCATCAGCCGTTACCTGACCGAACGCAGCCAGTTGTTCAGCGCGATTTCACACGATTTGCGCACGCCGATT ACCCGGTTGCGACTGCGGGTGGAATTGCTTGAAGACGAAAAACTGCAAGCCAAATTCGGCCGTGATCTGGATGAGCTGGAGCTGCTGGTCAAGGGCGCGC TGCAGTGCGTGAAAGACACCGACATTCACGAAAACATCGAGCCGGTGGACCTCAATCATGTGCTCGACTGTTTGGTGGAGCCGTATCTGGCACCCAACGG CAATGGCCGCGTGACTCAGCATGGCCGGGCGCTGGCGCCGTATCCCGGTAAACCATTGGCACTCAAGCGTTGCATCGGCAACCTGATCGACAACGCCTTG AAGTATGGGCAGAACGCGCATCTGCACATCGATGACGACGAGAGCGCGTTTGTCCTGCATGTCGACGATGAAGGGCCGGGCGTGCCGGAGCAGCGGCTGG AGCAGGTGTTTGAGCCGCACTTCCGTTTGGCCGGGCAGCAGCAGGGTTATGGCCTGGGGCTGGGGATTGCGCGCAACATTGCCCATAGCCATGGCGGTGA GGTCAGCCTGCAAAACCTGCGTGAAGGCGGGTTGCGGGTGACGTTGCAGTTGCCGCGTAGTGTTGATTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GAAGACCGCGTTATCGTTCTTCGCGAGCAAGCCCGCTCCCACATTGGATTTGTGTACGACGCAGAACCACTGTGGGAGCGGGCTTGCTCGCGAAGGCGTC AGTCCCTTCAATACATCCCTCAAGGCTAATGTCACAGCTCGGTGACATAACTCGCCCCCTTCGTTACCTGCCCGCCACCGCTCGTTGTTTAGACTGCCCC CAGTCATAACAACAAAAAAGGTACTCCCATGGACACCTTCCAACCCGCCTTCAGCAGTTGGCTGAACGCGCCTGCCCATCAGCAATGGCTTGCCGCCGAA GGCCTGCGCCTGCTGGCATTTGCCAAGGCTGCAAAGCTTGCCGAAGGCTTTGGCAATCTCGATGAAAAGGGTCGCCTGTCGGCCAACGCGCAAGCGGAAA CCATGAACACCGCGCGCATGACCCACAGCTTCGCCATGGCCCACATCCAGGGCCTGCCGGGTTTTGCCGAGCTGGTGGATCACGGCATCCAGGCCCTCAG
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| Amino Acid Sequence |
>histidine kinase
MATEFLRKLAGQVPVPRSLLGRMLLLTLLAVLFAQALSSVIWVSQLRATQLEGLVTSARSLAHSMTASVSYFRSLPVAFRPLVLDQLRSMGGTRFVVTLN DKPLGMEVLPITPRKEAVLKAVGEVLRESLGQDIDISVTFVSPEDLRIFNGGLKLDELPRSWAHYALTLEPVNPPVLVTQIQMAPGEWLYIASLLPEPYT SLEEQGLPAQQVWFIVLTSGFLLLFIGLLVHWQSRPLKRLARAARDMSLGAEVEPVAEGGGSEVVEVGRAFNAMRERISRYLTERSQLFSAISHDLRTPI TRLRLRVELLEDEKLQAKFGRDLDELELLVKGALQCVKDTDIHENIEPVDLNHVLDCLVEPYLAPNGNGRVTQHGRALAPYPGKPLALKRCIGNLIDNAL KYGQNAHLHIDDDESAFVLHVDDEGPGVPEQRLEQVFEPHFRLAGQQQGYGLGLGIARNIAHSHGGEVSLQNLREGGLRVTLQLPRSVD
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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