Pseudomonas lini DSM 16768, TU81_RS07435 (fliN)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas lini strain DSM 16768 2_928492_19.6844, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
ATCAACTCGGAAGTGAACCCGGCCATGGCCAACATCGTCGGCCCGAGCGAAGCGGTTGTGGTGTCGACGTTCCACATCGAACTCGATGGTGGTGGCGGTG ACCTGCACGTGACCATGCCGTACTCGATGATCGAGCCGGTACGCGAAATGCTCGACGCCGGCTTCCAGTCGGACCTCGACGATCAGGACGAGCGCTGGAT CAACGCCTTGCGCCAGGATGTGCTGGACGTCGATGTACCGATCGGTGCCACCGTAGCCCGCCGCCAGTTGAAGCTGCGCGACATCCTGCACATGCAGCCC GGGGATGTGATCCCGGTCGAGATGCCGGAAGAAATGATCATGCGCGCCAACGGCGTGCCGGCCTTCAAGGTCAAGATGGGCTCGCACAAAGGCAACCTCG CGTTGCAGGTTATCGAGCCGATCGAGCGCCGCTGACCGGCGCTCCAACCCCCTTTTAATTGACTGCTCTTGATTGAGCAGGTGCCCGCCGAGGACAAATG
DNA Sequence for Gene
>TU81_RS07435 |fliN
ATGAACGACGATATGAACGCCCAGGACGACCAGGCACTGGCTGATGAATGGGCTGCGGCCCTGGAAGAAACCGGTGACGCCGGGCAGGACGATATCGATG CCTTGTTGGCCGCCGATGCCACCGGTTCGTCGTCCAACCGTCTGCCAATGGAAGAGTTCGGCAGCGTGCCGAAGAGCAACGATCCGGTGACGCTGGACGG TCCGAACCTGGACGTGATCCTCGATATTCCGGTATCCATTTCCATGGAAGTCGGCAGCACCGATATCAACATCCGCAACCTGCTGCAACTCAACCAGGGG TCGGTGATCGAACTCGATCGTCTGGCCGGCGAGCCGCTGGACGTGCTGGTCAATGGCACGCTCATCGCCCACGGTGAAGTGGTGGTGGTCAACGAAAAGT TCGGCATCCGCCTGACCGACGTGATCAGCCCAAGCGAACGCATCAAGAAGCTGCGCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GTGAAAAAGGTTCTGGGGTTTGTGCTGGCGTTGCCGTTCAGTGTTCTGGCTGCCGAGCCGGTAGCGACCGCTACTGCGGCCGCCACGCCGGCTGTCAGCA GCGGTGTGGCCGGGCAATTGACGCAATTGGTATTCGGCTTGGTGCTGGTGCTGGGGTTGATCTTCTTCCTCGCCTGGCTACTGCGCAGGGTCCAGCAGGC CGGGCCGGCGGGCAAGGGGCAAGTGATCGAGCTGATCGGTTCTCGCGCGCTTGGCCCTCGTGACCGTTTGATGCTGGTGCAGGTCGGCAATGAACAAATC CTGCTCGGCCTGAGCCCCGGCACCATCACTGCGCTGCATGTGCTCAAGGAGCCGGTGCCAGTGCCCGCCACTACCGAGAAAGCGACCCCGGAGTTTGCTC AGCATCTGTTGAAGATGCTCGGCAAGGATCAGAAGGATAAGAAGTAATGGGTGCGCTACGCATCGTCTTGACGCTGGCCCTGATGCTGGCTGCGCCGCTG
Amino Acid Sequence
>flagellar motor switch protein
MNDDMNAQDDQALADEWAAALEETGDAGQDDIDALLAADATGSSSNRLPMEEFGSVPKSNDPVTLDGPNLDVILDIPVSISMEVGSTDINIRNLLQLNQG SVIELDRLAGEPLDVLVNGTLIAHGEVVVVNEKFGIRLTDVISPSERIKKLR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site