Pseudomonas lini DSM 16768, TU81_RS04855

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006633 fatty acid biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00406
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016836 hydro-lyase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00406
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF54637 Thioesterase/thiol ester dehydrase-isomerase IPR029069 HotDog domain superfamily 1 142 2.11E-52
CDD cd01288 FabZ - - 11 142 2.14725E-77
Gene3D G3DSA:3.10.129.10 Hotdog Thioesterase - - 3 146 8.1E-60
PANTHER PTHR30272 3-HYDROXYACYL-[ACYL-CARRIER-PROTEIN] DEHYDRATASE IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ 1 143 1.0E-53
Pfam PF07977 FabA-like domain IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ 11 137 5.2E-39
Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 2 145 35.957985
FunFam G3DSA:3.10.129.10:FF:000001 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ - - 1 146 3.1E-66
NCBIfam TIGR01750 JCVI: 3-hydroxyacyl-ACP dehydratase FabZ IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 2 142 1.5E-63

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.