Pseudomonas lini DSM 16768, TU81_RS26270

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas lini strain DSM 16768 11_244265_27.0086, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
AATCGAATCATCAGCGGTTTGTCCCTCGGTGTGCTCGTGGTCGAGGCGAGTGTTGCCAGTGGTTCATTGATCACCGCCAGGCTGGCGGCGGAACAGGGGC GTGAGGTGTATGCGATACCGGGGTCGATCCATCACCCTGGCGCAAAGGGTTGCCATCAACTGATCCGCGACGGCGCGGTGCTGGTGGAAACCATCGAGCA CATCCTCGAAGCCTTGCGCGGCTGGCAACGGCTGCCGTTATCCACAGAAACGCCGCCGGTGACAGAAACTCATCCGCTGCTCATATTGCTCCACGCGGCG CCCCTTACCAGCGAAGCCTTGTCGATCACCAGCGGCTGGGCGTTGTCGAAAGTGCTGGCAGCGCTGACGGAGCTGGAGATGGACGGCCGTGCGGTCTGTG AAAGTGGCCGCTGGCTTGCGCGGGGGCACTAGATTTTACAGGCTAGGTTTTGCATGGAAGATCGGTAAACTGCGCAGAGCCTTATTCCGGAGAGTTTTTC
DNA Sequence for Gene
>TU81_RS26270
ATGGTTAACAGTTGGCGTGTGCAACAAGCCGCAAGAGCCATTCGCGCAGGCGCGGTGATTGCCTACCCAACCGAAGCTGTCTGGGGCCTGGGTTGCGACC CCTGGGACGAAGAGGCGGTCTATCGTCTGCTGGCGATCAAGGGACGGTCTGTGGATAAAGGCCTGATTCTGGTGGCCGACAATATTCGCCAGTTCGACTT CCTCTTCGAAGACTTCCCTGAATTGTGGATGGACCGCATGGCCAGCACTTGGCCGGGCCCCAACACCTGGCTGGTGCCGCATCAGAATTTGTTGCCCCAG TGGATTACCGGCGTGCACGAAACAGTGGCGTTGCGGGTTAGCGATCACCCACTGGTGCGGGATTTGTGTGCGTTGGTCGGGCCGCTGGTGTCGACCTCGG CCAACCCTCAGGGGCAACCAGCGGCGCGGACGCGGCTTCGCGTGGAGCAGTATTTCCGTGGTCAGGTTGATTGGGTGCTGGGTGGCAATCTGGGTGGGCG CAAGAATCCGAGCGTGATTCGCGATCTGGCGACCGGCCACGTTGTGCGCCCGGATTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GACCGCGTCATCGTTCTTCGCGGGCAAGCCTCGCTCCCACAGGTCCGAGGCGTATACAAATTATGTGAACGACCGAAATCCTGTGGGAGCGGGCTTGCCC GCGATGGCGTCCTCAAGGCAACAAAACGGTTGAGCCCGTCGTGCGCCGCGCCGACAATTCGATCTGTGCTTTCGCCGCTTCAGCCAATGGATACCGCTGA CTGATGTCCACCTTCAACTTGCCGCTGATGATCATCTCGAACAGCTCATCGGCCATGCTTTGCAGGTTTTCAGCGTTGTTGGCGTAGGTCGCCAGGGTCG GTCGGGTCACGTACAGCGAACCCTTCCCCGCGAGAATCCCCAGATTCACTCCGTCCACTGCGCCCGAAGCATTACCGAAACTCACCACCAGCCCTCGAGG TGCGACGCTGTCGAGTGACGTCAGCCAGGTATCTTTGCCTACACCGTCGTACACCACCGGCACTTTTTTACCGTCAGTCAATTCCAGCACGCGTTGCGCG
Amino Acid Sequence
>tRNA threonylcarbamoyladenosine biosynthesis protein RimN
MVNSWRVQQAARAIRAGAVIAYPTEAVWGLGCDPWDEEAVYRLLAIKGRSVDKGLILVADNIRQFDFLFEDFPELWMDRMASTWPGPNTWLVPHQNLLPQ WITGVHETVALRVSDHPLVRDLCALVGPLVSTSANPQGQPAARTRLRVEQYFRGQVDWVLGGNLGGRKNPSVIRDLATGHVVRPD
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site