Pseudomonas lini DSM 16768, TU81_RS25970
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas lini strain DSM 16768 11_244265_27.0086, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GCTGGGCCGTGCGTAGCAATAGATGCAGCCGTGCTCGCAGCCGCGATAGGGATTGATCGAACGATCGAAGGGCAAGTCTGGCGAGTTGTTGCGGGTGATG ATGGTTTTTGCCGTCTCAATGCGCACTTCGGTGCCTTGGGTTATCGGCGCTTCCTGATACCAGCCGTCGTCCTCGGCCACTGAACGGTTAGGCGCGAAGC GGTTATGCGGGTTGGTGGCGGTGCCGCGGCCGCGAGGGGGCAATGGCGCATTCATGGGAGAGATCCTGATTGCTGTATGTGCATACAGTATCTCGAGGAA TGTCGGCGGGCTAGTGCCGTTCGGCGAATTGAATTACTGGATCTGGAAGATGGTGAAGAACCAGAATTCGACGCTCATTGGCTGTCAGACAATCCGGCAG AATCGTTTCACGTTTCATTGACACCTCCCTCACAGCCCTTTGACCGTTCAGGGCGCAAACTCGACGCCAATATCCAGCCTCTCCCTGAACGGTCCCGAGC
|
|
| DNA Sequence for Gene |
>TU81_RS25970
ATGCCCCTACCGCGTTATATCTCTGTGATGGGCCTATCGCTGATCGCATTTTTCAACCTGACACCGGTATTCGCTGACGACACTGCTTTGCCTCGCCCGG CAGAGTGGGCTCAATCAGTCGAGGTGCAATACAACCTCTATCAAATGTCCCCGACGCTCTATCGCAGCGCATTGCCGGATCAGGGAGCGGTGCCGTTACT GGAAAGGCTCAAGGTCGCAACCGTTATCAACTTCCTGCCCGAATCGGATTCACGCTGGTTATCCACGCCAGGTATCGCACAGGTACAGCTGCCTTATCGC ACCAATCACGTGGATGATGCGGATGTGCTCAAGGCCCTCCGCACGATTCAGACCGCCGAAACCAAAGGTCCTGTGCTTATGCACTGCAAGCACGGCTCTG ATCGCACCGGCCTGATGGCTGCAATGTACCGGGTGGTTGTGCAGGGTTGGAGCAAGGAAGACGCTCTGAATGAAATGACCCAAGGCGGCTTTGGTGACAG CACCCATTTCAAGGAAGGAGTGCGTTACATGATGCAGGTCGATGTCGACAAACTTCGTACGGCCCTGGCCAACGGTGATTGCAGCACGAGTCCATTTGCC AGTTGCTCGATGAAGAACTGGTTCAAATCGGCCCATGTCGAGTAA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GTAATACCTCCCACTGCATTGCGCAGTGGAAGGTTGTTTCCAGCACTCAGTGTTGCTCGTCTGGCTTCTTCTTCAACTTCGGGTTCGGGAAAAACTGCAC GGCCTGGACCTTGGCGTCCGGCACCTTGAGTGCCGAAGTATTGACCCGCGTGCCCAATTCCTTGGGCACCGATAGACCTTGTTCATTCAGCGTGTCGGAA TAACCGCAGGCCACGCACTCGCGATGCGGAACGGCATCTTCGCTCCACATCATCAACTTGTCCGGCTCGCTGCAGGCCGGGCAGACCGCCCCCGCGATAA AGCGTTTTTTGGTAATCACAGGTCCCTCACTCATGCTGCCGCGTCCTCACTCAGGCCGCTGTGACGCAAGAGTGCGTCAATCGATGGGGCACGGCCACGG AAGTCGACGAACAGCACCATTGGTTCCTGGGAACCGCCCCGTGCCAGGATCGCTTCGCGGAAGGCGCGACCGGTCTCGGCATTGAGCACGCCCTCTTCTT
|
|
| Amino Acid Sequence |
>protein-tyrosine phosphatase
MPLPRYISVMGLSLIAFFNLTPVFADDTALPRPAEWAQSVEVQYNLYQMSPTLYRSALPDQGAVPLLERLKVATVINFLPESDSRWLSTPGIAQVQLPYR TNHVDDADVLKALRTIQTAETKGPVLMHCKHGSDRTGLMAAMYRVVVQGWSKEDALNEMTQGGFGDSTHFKEGVRYMMQVDVDKLRTALANGDCSTSPFA SCSMKNWFKSAHVE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|