Pseudomonas knackmussii B13, PKB_RS24455
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas knackmussii B13 complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GGCCGAAGGCCTGGACATGCGTTACTACAACGTGATCTACGACATCATCGAAGACGTCAAGAAAGCCCTGACCGGTATGCTCGGCAGCGATGTTCGCGAG AACATCCTGGGTATCGCCGAAGTGCGTGACGTGTTCCGTTCGCCGAAGTTCGGCGCCGTCGCCGGCTGCATGGTCACCGAGGGTCTGGTGCACCGCAACC GTCCGATCCGCGTACTTCGCGACGACGTGGTGATCTTCGAAGGCGAACTGGAATCGCTGCGTCGCTTCAAGGACGACGTTGCCGAAGTTCGTAACGGCAT GGAATGCGGTATCGCCGTGAAGAGCTACAACGACGTTCGCGTCGGCGACAAGATCGAAGTGTTCGAGAAGGTCGAAGTCGCTCGTACCCTCTAAGAGGCA ACGAGCGTAATCGCAGCGCCCGGGACGGCTTTCCAGCTTTCCCGGGCGTTTGCCGCTTATTTGTCCGGTGCCGCCAAGGCAGCGGAAGCAGGTTAGGAAA
|
|
| DNA Sequence for Gene |
>PKB_RS24455
ATGGCCAAAGAGTACAGCCGTACACAGCGTATCGGCGATCAGATGCAGCGCGAACTGGCGCTGCTGATCCAGCGCGAGATCAAGGATCCGCGCCTGGGCC TGGTGACCATCACCGGCGTCGACGTGGCGCGCGATCTGTCCCATGCCAAGGTGTTCATCACCGTGATGGGCCAGGACGACAACGCCGAGGTGATCAAGCA GAACACCTCCATCCTCAATGACGCCGCTGGCTTCCTGCGCATGCAGTTGGGCAAGGCGATGAAGCTGCGCACCGTGCCGCAACTGCACTTCACCTACGAC GCGAGCATTCGTCGTGGTGCCGAGCTGTCGGCCCTGATCGAGCGGGCGGTGGCGGAAGATCGTCGCCACGGCGGCGGTTCCGAGGAGTAA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GGCGTGGCCCAGGTAAAACGTATCCGCCGTGCGGTCAACGGCGTGTTGGTGCTCGACAAGCCGCGCGGCATGAGCTCCAACCAGGCCCTGCAGAAGGTGC GTTGGCTGCTTAATGCCGAGAAGGCCGGGCACACCGGCAGCCTCGATCCTCTGGCGACCGGCGTGCTGCCGTTGTGCTTCGGTGAGGCCACCAAGTTCTC GCAGTACCTGCTGGATGCCGACAAGGCCTACGAAACCGTTGCCCGCCTGGGCATCACCACCACCACCGGCGACGCCGAGGGCGAAATCGTCGAGGAATCC GCGGTGACCGTCGGTCGGGAAGCGCTGGAGGCCGTGCTGCCGCGCTTCCGCGGCGAGATAGAGCAGGTTCCGCCGATGTACTCGGCACTCAAGAAGGACG GCCAGCCGCTGTACAAGTTGGCCCGGGCCGGTGAAGTAGTGGAGCGCGAGGCGCGTTCTGTTACTATTGCGCGCTTGGATTTGCTGGCCTTCGAGTCGCC
|
|
| Amino Acid Sequence |
>ribosome-binding factor A
MAKEYSRTQRIGDQMQRELALLIQREIKDPRLGLVTITGVDVARDLSHAKVFITVMGQDDNAEVIKQNTSILNDAAGFLRMQLGKAMKLRTVPQLHFTYD ASIRRGAELSALIERAVAEDRRHGGGSEE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|