Strain | Pseudomonas knackmussii B13 complete genome. [Details] | |
DNA Sequence Upstream of Gene |
CTCTATGTCAGCTACTTCCGCTCCATCCCGCTGCTGCTGGTGATCACCTGGTTTTACTTGGCAGTGCCCTTCATCCTGCGCTGGATCACCGGCAGCGACA CCCCGGTGGGGGCCTTCGCCAGCTGCCTGGTGGCCTTCGTGATGTTCGAGGCGGCGTACTTCTGCGAGATCGTCCGCGCCGGAATCCAGTCCATTCCCAA AGGCCAGATGGGCGCGGCCCAGGCCCTGGGCATGACCTACGGCCAGTGCATGCGCCTGATCATCCTGCCGCAGGCCTTCCGCAAGATGACCCCGCTGCTG CTGCAGCAGAGCATCATCCTGTTCCAGGACACCTCGCTGGTCTACACCGTCGGCCTGATGGACTTCCTCAACGCGGCGCGCTCGCGCGGCGACATCACCG GCCAGCCCCACGAGTTCCTGATCTTCGCCGGTCTCGTCTACTTCCTCGTCAGCTTCTCCGCCTCGCTCGCGGTCAAGCGCCTGCAGAAAAGGTTCGCCCT
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DNA Sequence for Gene |
>PKB_RS23930
ATGATCTCCATCCAGAACGTCAACAAGTGGTACGGCGATTTCCAGGTCCTCACCGACTGCAACACCTCGGTCGCCAAGGGTGAAGTGGTGGTGGTCTGCG GGCCGTCCGGCTCGGGCAAGTCGACCCTGATCAAGTGCGTCAACGCCCTGGAGCCGTTCCAGAAAGGCGACATCGTGGTCGACGGCGCGTCCATCGCCGA TCCGAAGACCAACCTGCCCAAGCTGCGCTCGCGGGTCGGCATGGTGTTCCAGCACTTCGAGCTGTTTCCGCACCTGAGCATCACCGAGAACCTGACCATC GCCCAGACGAAGGTGCTCGGCCGCGGCAAGGAAGAGGCCACCGAGAAGGGCCTGGCGCTGCTCGACCGCGTCGGCCTCAAGGCCCACGCGCACAAGCACC CCGGCCAGCTCTCCGGCGGCCAGCAGCAGCGCGTGGCCATCGCCCGCGCGCTGGCCATGGACCCGATCGTGATGCTGTTCGACGAACCGACCTCGGCGCT CGACCCGGAGATGGTCAACGAGGTGCTCGACGTCATGGTCCAGCTGGCCCAGGAAGGCATGACCATGATGTGCGTGACCCACGAGATGGGCTTCGCCCGC AAAGTCGCCGACCGGGTGATCTTCATGGACCGCGGGCAGGTCGTGGAGGACTGCGCCAAGGAGGAGTTCTTCGGCAACCTCGACGGCCGCTCCGAGCGTG CCAGGCAGTTCCTCGCCAAGATCCTCAGCCACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CCTGTGCTTTTCGTAGGAGCGAGCTTGCTCGCTCCTACAGAGAGCACTTCGGCGCTCCCTCCCTCCGTCGCCTACCCCGGCGACGGGCTGGCCCACCCCC GACGACTGTGCTGCAATGCCCGCCCCGCTCCCCGCCGTGTCCCTGCAGATCGTGAAGCCGAGCCTGATTCGCAACCTGCTGCTGCCGATTCCCCTGCTCC TGCTGATGCTCGGCTTCGGCTATGGCGGCTACCTGGTCAGCAGCGGCGCCGGCACCCGCGCGCTCATCGACAGCGGCGAGCGCCAGCTCGAACTGCACGC CAGCGGCGTGGAGCGCGAGATCAGCCGCTACACCTACCTGCCCAGCCTGCTGGAGCTGGAAGGCAACGTCAGCCGCCTGCTGCTGGAGCCCACGCCGTAC CGTCGCGACCTGGTCAACGCCTACCTCGAAGGCCTCAACCGCCGCGCCGGCAGCCGCGCCATCTACCTGCTCGACACCAGCGGCCGGGTGCTGGCCACCA
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Amino Acid Sequence |
>amino acid ABC transporter ATP-binding protein
MISIQNVNKWYGDFQVLTDCNTSVAKGEVVVVCGPSGSGKSTLIKCVNALEPFQKGDIVVDGASIADPKTNLPKLRSRVGMVFQHFELFPHLSITENLTI AQTKVLGRGKEEATEKGLALLDRVGLKAHAHKHPGQLSGGQQQRVAIARALAMDPIVMLFDEPTSALDPEMVNEVLDVMVQLAQEGMTMMCVTHEMGFAR KVADRVIFMDRGQVVEDCAKEEFFGNLDGRSERARQFLAKILSH
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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