Pseudomonas knackmussii B13, PKB_RS19435 (fliN)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas knackmussii B13 complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GGCCTGGAGCGCAGTGCTGCCGATCACCTTCGAGTACGTCAACTCGGAAGTGAACCCGGCGATGGCCAACATCGTCAGCCCCAGCGAAGTGGTGGTGGTA TCGACCTTCCACATCGAGCTCGACGGCGGCGGCGGCGACCTCCATGTGACCCTGCCGTATTCGATGATCGAGCCGATCCGCGAGATGCTCGACGCCGGCT TCCAGTCCGACGTCGACGACCAGGACGAGCGCTGGATCAACGCCCTGCGCGAGGACATCCTCGACGTCAACGTGCCGATCGACGCGACCGTGGTGCGCCG CCAGCTGCGCCTGCGCGACATCCTGCACATGCAGCCGGGCGACGTGATCCCGGTGGAACTGCCCGAACACATGATCATGCGCGCCAACGGCGTGCCTTCG TTCAAGGTCAAGCTGGGTTCGCACAAGGGCAACCTGGCCTTCCAGATTCTCGATCCGCTCGAGCGCCCGCGCTGAGCGAATCCCCTCCGAGGACCCGACA
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| DNA Sequence for Gene |
>PKB_RS19435
|fliN
ATGACAGATGAAGACAAAGTAAGCGCCGAGGAACAGGCACTGGCGGACGAGTGGGCCGCGGCCCTGTCCGAAGCCGGTGACGCCAACCAGGACGACATCG ACGCGCTGATGGCCCAGGGCACCCCGGCCGTTCCGACGGCGCCGCGCGCGCCCATGGAAGAGTTCGGCATGGCCCCGCGCCCGCCGGCCATCGCCGGCCT GGAAGGGCCGAACCTGGACGTGATCCTGGACATCCCGGTGACCATTTCCATGGAGGTCGGGCACACCGACATCACCATCCGCAACCTGCTGCAGCTGAAC CAGGGCTCGGTGATCGAACTCGACCGCCTGGCCGGCGAGCCGCTGGACGTGCTGGTCAACGGCACCCTGATCGCCCACGGCGAAGTGGTGGTGGTCAACG AGAAGTTCGGCATCCGCCTGACCGACGTGATCAGCCCCAGCGAACGCATCAAGAAGCTGCGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCATGGGCCGCCTGTACGCGTTTCTCCTCACCCTGCCGCTGCTCGGCCTCGCTGGCCTGGCGTCGGCCGCCGAGGACGATGCGGCCGTCGCCCCGGCGCC GGCCATCGTCCATGCGAGCACCTCGCCGAGCCTGATCACCGGCAGCGCCGGCGCGCAGCTGCTGCAGCTGCTGGTCGGCCTGGTGCTGGTGGTCGGCCTG ATCTTCCTGCTCGCCTGGCTGGTGCGGCGCATGCAGCACTTCGGCCCGCGCAGCAACCAGGCGATCAAGCTGGTGGCCAGCCAGGCGCTGAGCCCGCGCG ACCGCCTGTTGCTGGTGCAGGTCGGCGAGGAACAGATCCTCCTCGGCCTGACCCCCGGGCGCATCACCCCGCTGCACGTGCTCAAGGAGCCGGTGCGCAG CGTCGAGCCCGCCGAGCCGGCCACGCCGGAGTTCGCCCAGCGCCTGCTGGAACTGCTGAACAAGGACAAGGGCCGCCCGCAATGAGTCCCCGTGTCGTAG
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| Amino Acid Sequence |
>flagellar motor switch protein
MTDEDKVSAEEQALADEWAAALSEAGDANQDDIDALMAQGTPAVPTAPRAPMEEFGMAPRPPAIAGLEGPNLDVILDIPVTISMEVGHTDITIRNLLQLN QGSVIELDRLAGEPLDVLVNGTLIAHGEVVVVNEKFGIRLTDVISPSERIKKLR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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