Pseudomonas knackmussii B13, PKB_RS15550

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas knackmussii B13 complete genome. [Details]
DNA Sequence Upstream of Gene
CCCCCGGCCTCTATGCACGGCTGAAACTGGTCGGCTCCGGCACCTACCCGGCGGCGCTGATCAAGGACGAAGCGGTCGGCACCGACCTTGGCAAGAAGTT CGTCCTGGTGGTCGGCGCCGACAGCAAGGTCGCCTACCGCAGCATCGAGCTCGGGCCGAAACTGGAAGGCCTGCGCATCGTCCGCAGCGGCCTGGCCAAG GGCGACCGCATCGTCGTCAACGGCCTGCAACGCGTACGCCCCGGGGCCCAGGTGGAAGCCCAGGGCGTGCCCATGGCCAGCCCCGATACGCTAGCCGCCC TGGCCAGCCAACTGCAGGCGGTGGAAGCCGCCAACCCGCAGAAGGTTGCCGAGCAATCGTCGGGCAAGCCCAACCGCATCTGACGGCAATGCGCCCCTGA CGGGGCTCCACGAGAACGCAGTACCCGGCCCTGGCCCCATCCAGGGCCACGGGTGACCTTTGTCCAGGGTTTCGCGCCGCAAGCGCATCAGGAACGAACC
DNA Sequence for Gene
>PKB_RS15550
ATGAACTTCTCGCAATTCTTCGTGCAGCGGCCGATATTCGCCGCCGTGCTCTCGCTGATCATCCTGATCGGCGGGGCCATCTCGCTGTTCCAGCTGCCGA TCAGCGAATACCCGGAAGTGGTACCGCCCACCGTGGTGGTGCGCGCCAACTTCCCCGGCGCCAACCCCAAGGTGATTGGCGAAACCGTCGCCGCGCCGCT GGAGCAGGCCATCACCGGCGTCGAGAACATGCTCTACATGTCCTCGCAGTCCACCGCCGACGGCAAACTGACCCTGACCATCACCTTCGCCCTGGGCACC AACCTGGACAACGCCCAGGTGCAGGTGCAGAACCGCGTAACGCGCACCGAGCCGAAGCTGCCGGAAGAGGTCACGCACATCGGCATCACCGTCGACAAGG CTTCGCCCGACCTGACCATGGTCGTGCACCTGACCTCGCCGGATAAGCGCTACGACATGCTCTACCTGTCCAACTACGCCATCCTCAACATCAAGGACGA GCTGGCGCGCCTGGACGGCGTGGGCGACGTGCAGCTGTTCGGCATGGGCGACTACTCGCTGCGCGTGTGGCTCGACCCGAACAAGGTGGCCGTGCGCAAC CTGACCGCCACCGACGTGGTCAATGCCATCCGCGAGCAGAACCGCCAGGTAGCCGCCGGCGCCCTGGGCGCACCGCCCTCCCCAACCGCCACCAGCTTCC AGCTGTCGATCAACACCCAGGGTCGCCTGGTCACCGAGGAAGAGTTCGAGAACATCATCATCCGCAGCGGCCCCAACGGCGAGATCACCCGCCTGAAGGA CATCGCCCGCGTCGAACTCGGCTCCAGCCAGTACGCCCTGCGTTCCATGCTGGACAACCAGCCGGCCGTGGCCATCCCGATCTTCCAACGTCCCGGCTCC AACGCCATCGCCATCTCCAACGAGGTGCGCGCGAAGATGGCCGAACTGAAGAAGACCTTCCCGCAGGGCGTGGATTACTCCATCGTCTATGACCCGACCA TCTTCGTCCGCGGCTCCATCGAGGCGGTGGTGCACACCCTGTTCGAAGCGCTGATCCTGGTGGTGCTGGTGGTCGTGCTGTTCCTGCAGACCTGGCGCGC CTCGATCATCCCGCTGGCCGCCGTACCGGTGTCGCTGATCGGCACCTTCGCGGTGATGCACGCCTTCGGCTTCTCGCTCAACGCGCTGTCGCTGTTCGGC CTGGTGCTGGCGATCGGCATCGTGGTGGACGACGCCATCGTGGTGGTGGAGAACGTCGAGCGGAACATCAGCCTTGGCCTCACGCCGGTCGAGGCGACCA AGCGCGCCATGAAGGAAGTGACTGGGCCGATCATCGCCACCGCGCTCGTGCTCTGCGCCGTGTTCGTGCCGACCGCCTTCATCTCCGGCCTCACCGGGCA GTTCTACCGCCAGTTCGCGCTGACCATCGCCATCTCCACGGTGATCTCGGCGTTCAACTCGCTGACCCTGTCGCCGGCGCTCTCGGCCGTGCTGCTGAAA GGGCACCACGAGCCGAAGGACCGCTTCTCGGTACTGCTCGACAAGCTGCTCGGCAGTTGGCTGTTCCGCCCGTTCAACCGCTTCTTCGACCGCGCCAGCC ATGGCTACGTCGGCACCGTCACCCGCGTGCTGCGCGGCAGCTCCATCGCCGTGCTGATCTATGGCGGCCTGATCGCGCTGACCTGGCTGGGCTTCTCCAG CACCCCGACCGGCTTCGTGCCGCAGCAGGACAAGCAGTACCTGGTCGCCTTCGCCCAACTGCCCGACGCCGCCACCCTCGATCGCACCGAGGAAGTGATG AAGCGCATGTCGGACATCGCCGGCAAGCACCCGGGCATCGAGCACACCGTGTCCTTCCCCGGCCTGTCGATCAACGGCTTCACCAACAGCCCGAACAGCG GCATCGTCTTCACCCCGCTGAAGGACTTCGACCAGCGCAAGGGCCCGGGCATGTCGGCCAACGAGATCGCCGCCGAACTGAACAAGCAGTTCGCCGACAT CCAGGACGCCTACATCGCCATCTTCCCGCCGCCGCCCGTGCAGGGGCTGGGGACCATCGGCGGCTTCCGCGTGCAGGTCGAGGACCGTGGCGGTCTGGGC TATGAGGAGCTGTACAAACAGGTGCAGAACGTCCTCGCCAAGGCCCGTGCGACGCCCGAGCTGAACCCCATGTCGGTGTTCACCAGCTACCAGGTGAACG TGCCGCAGGTGGATGCCGCCATCGACCGTGAAAAGGCCAAGACCCACGGCGTGGCCATCAGCGACATCTTCGACACCCTGCAGGTGTACCTGGGTTCGCT GTACGCCAACGACTTCAACCGCTTCGGCCGCACCTACCAGGTCAACGTCCAGGCCGACCAGCAATTCCGCCTGGAGCCCGAGCAGATCGGCCAGCTGAAG GTGCGCAACAACCGCGGCGAGATGGTTCCGCTGGCGACCTTCATCAAGGTCAGCGACACCTCCGGCCCCGACCGCGTAATGCACTACAACGGCTTCATCA CCGCCGAGATCAACGGCGCGGCAGCCCCCGGCTACAGCTCCGGCCAGGCCGAGGCGGCGATGGAGAAACTGCTGAAGCAGGAACTGCCCAACGGCATGAC CTACGAGTGGACCGACCTGACCTACCAGCAGATCCTCGCCGGCAACTCCGCGATCTACGTGTTCCCGCTCTGCGTGCTGCTCGCCTTCCTGGTGCTGGCC GCGCTGTACGAGAGCTGGGGCCTGCCGCTGGCGGTGATCCTGATCGTGCCCATGACGCTGCTGTCGGCCATCGGCGGGGTGATCCTCTCCGGCGGTGACA ACAACATCTTCACCCAGATCGGCCTGATCGTACTGGTGGGCCTGGCGTGCAAGAACGCGATCCTCATCGTCGAGTTCGCCAAAGACAAACAGGAAGAAGG CATGGACCGCGTCAGCGCCGTACTGGAAGCCTGCCGCCTGCGCCTGCGGCCGATCCTGATGACCTCCATCGCCTTCATCATGGGCGTGGTGCCGCTGGTC CTGTCCTCCGGCGCCGGTGCCGAAATGCGCCATGCCATGGGTGTCGCGGTGTTCTCCGGGATGCTCGGCGTGACCTTCTTCGGCCTGCTGCTGACGCCGG TGTTCTACGTGCTCATCCGTCGCTTCATGGAAGCCCGCGAAGCGAAGAAACAGCAACGCGCCACCCTGAACCACGAGGCTAGCCACGCATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
AATTGAAAGTCTTCGCCCCGGCGCTGCTGGCCCTGAGCCTCAGCGCCTGCATGGTCGGCCCCGACTACAAGCAGCCGGACACCGCGCCGGCGCAACTCGA CACCAGCGGCGCCAACCTCGACCGCGGCCGCTTCGAGGACGCCTGGTGGAAGCAGTTCGACGACCCGGTGCTGTCGCAACTGGTCGAGCAGGCCATGAAG GACAACCGCGAGCTGCGCGTGGCCTACGACCGCGTGGTGGCATCGCGGGCGATCCGCGACGACGTCGCCAACGATCGCTACCCGACCGTGACCAGCCGCG CCTCCTCGCAGATCGGCAAGGGCCAGGTGCCCGGCGAGACCGAAGACCGGGTCAACCAGGAGCGCTACGACCTGGGCCTCGACATGATCTGGGAAGTCGA CCTGTTCGGCCGCGTGCGCCGCGAGCTGCAATCGGCAGACGCCACCAGCCAGGCGATCCAGGCCGACCTGCAGCAACTGCAGGTCAGCCTGATCGCCGAG
Amino Acid Sequence
>multidrug efflux RND transporter permease subunit
MNFSQFFVQRPIFAAVLSLIILIGGAISLFQLPISEYPEVVPPTVVVRANFPGANPKVIGETVAAPLEQAITGVENMLYMSSQSTADGKLTLTITFALGT NLDNAQVQVQNRVTRTEPKLPEEVTHIGITVDKASPDLTMVVHLTSPDKRYDMLYLSNYAILNIKDELARLDGVGDVQLFGMGDYSLRVWLDPNKVAVRN LTATDVVNAIREQNRQVAAGALGAPPSPTATSFQLSINTQGRLVTEEEFENIIIRSGPNGEITRLKDIARVELGSSQYALRSMLDNQPAVAIPIFQRPGS NAIAISNEVRAKMAELKKTFPQGVDYSIVYDPTIFVRGSIEAVVHTLFEALILVVLVVVLFLQTWRASIIPLAAVPVSLIGTFAVMHAFGFSLNALSLFG LVLAIGIVVDDAIVVVENVERNISLGLTPVEATKRAMKEVTGPIIATALVLCAVFVPTAFISGLTGQFYRQFALTIAISTVISAFNSLTLSPALSAVLLK GHHEPKDRFSVLLDKLLGSWLFRPFNRFFDRASHGYVGTVTRVLRGSSIAVLIYGGLIALTWLGFSSTPTGFVPQQDKQYLVAFAQLPDAATLDRTEEVM KRMSDIAGKHPGIEHTVSFPGLSINGFTNSPNSGIVFTPLKDFDQRKGPGMSANEIAAELNKQFADIQDAYIAIFPPPPVQGLGTIGGFRVQVEDRGGLG YEELYKQVQNVLAKARATPELNPMSVFTSYQVNVPQVDAAIDREKAKTHGVAISDIFDTLQVYLGSLYANDFNRFGRTYQVNVQADQQFRLEPEQIGQLK VRNNRGEMVPLATFIKVSDTSGPDRVMHYNGFITAEINGAAAPGYSSGQAEAAMEKLLKQELPNGMTYEWTDLTYQQILAGNSAIYVFPLCVLLAFLVLA ALYESWGLPLAVILIVPMTLLSAIGGVILSGGDNNIFTQIGLIVLVGLACKNAILIVEFAKDKQEEGMDRVSAVLEACRLRLRPILMTSIAFIMGVVPLV LSSGAGAEMRHAMGVAVFSGMLGVTFFGLLLTPVFYVLIRRFMEAREAKKQQRATLNHEASHA
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site