Pseudomonas knackmussii B13, PKB_RS13985

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas knackmussii B13 complete genome. [Details]
DNA Sequence Upstream of Gene
CGTCATGCACCGCGACATTGACCTTCGGGTAGCGGCTGCGGAAAGCGATGAGCGCCGCCGGCAACAGGTTGCCGGCGAAGGAGGGCATGGCGGCGATGGA AACCTTGCCCAGCTGCAGCGTGAAGTGCTGGCGCAGCAGTTCCTCGGCGTTGTCCCAGTCGGCCAGCAGGCGACGAGCGATGGGCAGCAGCGTCTCGCCC TCTGGCGTCAGCGAGACACTGCGCGTGGTGCGAACCAGCAATTGCCCGCCGAGGGATTCTTCGAGGTTCTTGATCGCCAGGCTCAGCGCCGGTTGCGACA GGTGCAGGCGCTCGCAGGCCTGGGCGAAGCTCAGGGTTTGCGCCACGGCGAGGAAGGCGCGCAGTTGTTTGACGGTCATTGATTTGCAAAGCCAATCAAT CGAGAAGAAAAACAAACTTAACAAATCAGTTGATTGCGGAGAAGCTGCGGCCATCTCCGACCGGCCGGTCGGAAACCCTAACAACAAGAGGCAGCAGCAA
DNA Sequence for Gene
>PKB_RS13985
ATGGCAGGACTCGACAAGCGGGTTGGCAGTTACGAGGAAGCCCTGGCCGGGCTCACCGACGGCATGACGGTAGTGGCGGGCGGTTTCGGCCTCTGCGGCA TCCCGGAAAACCTGATCGCGCAAATCCGCCGCATGGGCGTGAAAGGCCTGACCGTGGTGTCGAACAACTGCGGCATCGACGGCTTCGGCCTCGGCGTGCT GCTGGAAGACCGCCAGATTCGCAAGATGATCGCCTCCTACGTCGGCGAAAACGCCCTGTTCGAGCAGCAGCTGCTGTCCGGCGAGCTGGAAGTGGAACTC ACTCCGCAAGGCACCCTGGCCGAAAAACTGCGCGCCGGCGGCGCCGGCATCCCTGCCTTCTTCACCGCCACCGGCTTCGGCACCCCGGTCGCCGAGGGCA AGGAAGTGCGCGAGTTCGACGGCCGCCAATACATCATGGAGCGCGCCATCACCGGCGACTTCGCCATCGTCAAGGGCTGGAAGGCCGACCACTACGGCAA CGTGATCTACCGCCACACCGCGCAGAACTTCAACCCGGTGGTTGCCACCGCGGGCCGCATCACCGTGGTCGAGGTGGAAGAAATCGTCGAGCCGGGTGAA CTGGACCCGACCCAGATCCACACCCCCGGCATCTACGTCGACCGAATCATCCAAGGAACCTTCGAAAAGCGTATCGAGAAACGCACCGTACGTTCCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCCCACCGGACAAGAGAGACAAGACCATGGCACTGACCCGCGAACAGATGGCCCAGCGCGTCGCGCGCGAGCTCAAGGACGGCTACTACGTGAACCTCGG CATCGGCATCCCGACCCTGGTGGCCAACTACGTGCCCGAGGGCATGGAAGTGATGCTGCAATCGGAGAACGGCCTGCTCGGCATGGGCGCCTTCCCGACC GAGGACGAAGTCGACGCCGACATGATCAACGCCGGCAAGCAGACCGTCACCGCCGTGAAGGGCGCGTCGATCTTCTCCTCGGCCGAGTCCTTCGCGATGA TCCGCGGCGGCCACGTCGACCTGACCGTGCTCGGCGCCTTCGAGGTGGACGTGCAGGGCAACATCGCCTCCTGGATGATCCCCGGCAAGCTGGTGAAAGG CATGGGCGGCGCGATGGACCTGGTGGCCGGCGCCGACAACATCATCGTCACCATGACCCACGCCTCCAAGGACGGCGAGTCCAAGCTGCTCGACCGCTGC
Amino Acid Sequence
>succinyl-CoA:3-ketoacid-CoA transferase
MAGLDKRVGSYEEALAGLTDGMTVVAGGFGLCGIPENLIAQIRRMGVKGLTVVSNNCGIDGFGLGVLLEDRQIRKMIASYVGENALFEQQLLSGELEVEL TPQGTLAEKLRAGGAGIPAFFTATGFGTPVAEGKEVREFDGRQYIMERAITGDFAIVKGWKADHYGNVIYRHTAQNFNPVVATAGRITVVEVEEIVEPGE LDPTQIHTPGIYVDRIIQGTFEKRIEKRTVRS
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site