Strain | Pseudomonas knackmussii B13 complete genome. [Details] | |
DNA Sequence Upstream of Gene |
CGTCGGGCGCAACTTCTTCGACCTCAACTACAGCGAGGCCGAGAAGCTGTCCGGGCTGAAGAGCCGCACCTTCCTCGCCGAGCTGATGCCGCACTACCCT ATCTACGTGCCGCTGCTGCCGGACGAGGCGCAAGAGGCCATGGGCCAGGTGCATCCGCGCGCGCAGATCACCTTCGACATCCTGATGCGCGAAGGCTTCG AGACCGACAACTACATCGACATCTTCGATGGCGGTCCGACCCTGCATGCGCGCACTTCGGGCATCCGTTCGATCGCCCAGAGCCGCCTGGTGCCGGTGCG CATCGGCGAAGTGCCGAAGGCGACCCGCAGCTACCTGGTCACCAACGGCCTGCTCCAGGACTACCGCGCGGTGGTCGCCGAGCTCGACTGGGTTCCCGGC AAGCCGGTCACCCTGAGTGCGGAAACCGCCGAGGCCCTGGGCATCGGCGAAGGCGCCAGCGTCCGCCTGGTGGCGGTCTAACCAGTTCCGGGGAATCCAT
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DNA Sequence for Gene |
>PKB_RS07865
ATGATCGTTCGTCCTGTCACCAGCGCCGACCTGCCGGCCCTCTTCGATCTGGCGCGCAGCACCGGCACCGGGCTGACCACGCTGCCGGCCAACGAGCAGC GCCTGGCGCACCGCGTCAGCTGGGCCGAGAAGGCCTTCCGTGGCGAAGCCGAGCGCGCTGACGCCGACTACCTGTTCGTGCTCGAGAACGACGACGGCAA GGTCGTCGGCATCTCCGCCGTAGCTGGCGCAGTCGGCCTGCGCGAGCCCTGGTACAACTACCGCGTCGGCCTCACTGTCAGCGCCTCCCAGGAGCTGGGC ATCCATCGCGAGATTCCCACGCTGTTCCTGGCCAACGACCTCACCGGGCAGTCCGAGCTGTGCTCGCTGTTCCTGCACGCCGATGCGCGGACCGGCCTCA ACGGTCGACTGCTGTCCAAGGCGCGCTTCATGTTCATCGCCGAGTTCCGCGAACTGTTCGGCGACAAGGTGATCGCCGAGATGCGCGGCATGTCCGACGC TGCCGGCCGCTCGCCGTTCTGGGAAAGCCTGGGCCGGCACTTCTTCAAGATGGAGTTCAGCCAGGCCGACTACCTGACCGGCGTCGGCAACAAGGCCTTC ATCGCCGAACTGATGCCGAAATTCCCGCTGTACACCTGCTTCCTCTCGGAAGAGGCGCGCAACGTGATCGGCCGCGTGCATCCGGACACCGAGCCGGCGC TGGCCATGCTCAAGGGGGAAGGCTTCAGCTACCAGGGCTACGTCGACATCTTCGACGCCGGCCCGGCCATCGAGGCGCCGACCGAGAAGATCCGTGCCAT CGCCGACAGCCAGACGCTGGTGCTGGCCATCGGCACGCCGGGCGACGATGCCGAGCCGTACCTGATCCACAACCGCAAGCGCGAGGAGTGCCGCATCACC GCGGCGCCGGCGCGGGTCGCCGCCGGCTCCCTGGTGGTCGACGCGCAGACCGCCAAGCGCTTGCGTCTTGCCGCGGGCGCCTCGGTGCGCGCGGTGCCGC TGTCCGCCGGAAAACGCAGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TCCCGCGCGGATCGGAGGAGAACAAGAGATGACTACCCACTACATCGCCGGCCAGTGGCTGGCGGGCGAGGGCGAGACCCTGGAATCCCTCGACCCGGTC AGCCAGGCCGTGGTCTGGCACGGCCGTGGCGCCAGTGCCGCGCAGGTCGGCGCCGCAGTCGCGGCCGCCCGTGCGGCCTTCCCGGCCTGGGCTCGTCGCC CGCTGGAAGAGCGCATCGCCGTGCTGGAGGCCTTCGCTGCAACCCTCAAGGCGCGTAGCGACGAGCTGGCCCGGGCGATCGGCGAGGAAACCGGCAAACC GCTGTGGGAAGCGGCCACCGAAGTCACCAGCATGGTCAACAAGGTGGCCATCTCGGTGCAGGCTTATCGCGAGCGTACCGGGCTGAAGTCCGGCCCGCTG GCCGATGCCACCGCTGTGCTGCGGCACAAGCCGCATGGCGTGGTAGCCGTGTTCGGTCCCTACAACTTCCCCGGCCACCTGCCCAACGGGCACATCGTTC
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Amino Acid Sequence |
>arginine N-succinyltransferase
MIVRPVTSADLPALFDLARSTGTGLTTLPANEQRLAHRVSWAEKAFRGEAERADADYLFVLENDDGKVVGISAVAGAVGLREPWYNYRVGLTVSASQELG IHREIPTLFLANDLTGQSELCSLFLHADARTGLNGRLLSKARFMFIAEFRELFGDKVIAEMRGMSDAAGRSPFWESLGRHFFKMEFSQADYLTGVGNKAF IAELMPKFPLYTCFLSEEARNVIGRVHPDTEPALAMLKGEGFSYQGYVDIFDAGPAIEAPTEKIRAIADSQTLVLAIGTPGDDAEPYLIHNRKREECRIT AAPARVAAGSLVVDAQTAKRLRLAAGASVRAVPLSAGKRS
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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