Pseudomonas knackmussii B13, PKB_RS03965
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Biological Process | GO:0000160 | phosphorelay signal transduction system |
Inferred from Sequence Model
Term mapped from: InterPro:SM00448
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF52172 | CheY-like | IPR011006 | CheY-like superfamily | 15 | 144 | 3.42E-22 |
| SMART | SM00448 | REC_2 | IPR001789 | Signal transduction response regulator, receiver domain | 14 | 132 | 1.9E-13 |
| Gene3D | G3DSA:3.40.50.2300 | - | - | - | 14 | 142 | 5.3E-23 |
| SMART | SM00052 | duf2_2 | IPR001633 | EAL domain | 151 | 396 | 1.1E-82 |
| CDD | cd01948 | EAL | IPR001633 | EAL domain | 157 | 393 | 2.37251E-95 |
| SUPERFAMILY | SSF141868 | EAL domain-like | IPR035919 | EAL domain superfamily | 157 | 404 | 6.67E-76 |
| PANTHER | PTHR33121 | CYCLIC DI-GMP PHOSPHODIESTERASE PDEF | - | - | 148 | 400 | 4.8E-79 |
| Gene3D | G3DSA:3.20.20.450 | EAL domain | IPR035919 | EAL domain superfamily | 154 | 409 | 2.3E-81 |
| Pfam | PF00072 | Response regulator receiver domain | IPR001789 | Signal transduction response regulator, receiver domain | 16 | 131 | 1.0E-16 |
| CDD | cd00156 | REC | - | - | 17 | 98 | 3.67225E-15 |
| Pfam | PF00563 | EAL domain | IPR001633 | EAL domain | 157 | 391 | 9.6E-64 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.