Pseudomonas knackmussii B13, PKB_RS03250
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Molecular Function | GO:0016993 | precorrin-8X methylmutase activity |
Inferred from Sequence Model
Term mapped from: InterPro:SSF63965
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Biological Process | GO:0009236 | cobalamin biosynthetic process |
Inferred from Sequence Model
Term mapped from: InterPro:SSF63965
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
|
|
Pathways
| Database | Xref | Pathway | Version | Evidence | PMID |
|---|---|---|---|---|---|
| KEGG | pkc00860 | Porphyrin and chlorophyll metabolism | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
| KEGG | pkc01100 | Metabolic pathways | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Gene3D | G3DSA:3.40.50.10230 | - | IPR036588 | Precorrin-8X methylmutase CobH/CbiC superfamily | 1 | 207 | 2.1E-87 |
| Pfam | PF02570 | Precorrin-8X methylmutase | IPR003722 | Cobalamin biosynthesis precorrin-8X methylmutase CobH/CbiC | 11 | 205 | 7.3E-74 |
| SUPERFAMILY | SSF63965 | Precorrin-8X methylmutase CbiC/CobH | IPR036588 | Precorrin-8X methylmutase CobH/CbiC superfamily | 1 | 205 | 1.44E-75 |
| PANTHER | PTHR43588 | COBALT-PRECORRIN-8 METHYLMUTASE | - | - | 1 | 205 | 1.4E-67 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.