Strain | Pseudomonas knackmussii B13 complete genome. [Details] | |
DNA Sequence Upstream of Gene |
GCACTGAATATAAGACAGTAACGATTCACCGAGATGCTAAGGGCGAACATGGAACAGCATTCCGATGGTTTGAAGGTAATGGTGATCGACGATTCCAAAA CGATTCGTCGCACCGCGGAAACCTTGCTGAAGAAAGTCGGCTGTGACGTCATCACGGCGATCGACGGCTTCGACGCTCTGGCGAAGATTGCCGATACCCA TCCCAACATCATCTTTGTCGACATCATGATGCCGCGACTCGACGGCTATCAGACCTGCGCCCTGATCAAGAACAACAGCGCCTTCAAATCCACCCCGGTG ATCATGCTGTCCTCCAAGGACGGCCTGTTCGACAAGGCCAAGGGTCGAATCGTCGGCTCCGACCAGTACCTCACCAAGCCTTTCAGCAAGGAAGAGCTGC TCGGCGCCATCAAGACCCATGTGCCCGACTTCACCCCGGTGGAGCAAGCTTCCTGATGTCCGGCCTTTGTGCCGGTGATGCCTTTTCCTAGGGGAACCCC
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DNA Sequence for Gene |
>PKB_RS02115
ATGGCTCGAATCCTGATTGTTGATGACTCGCCGACCGAGATGTACAAGCTGACCGCGATGCTGGAGAAGCACTCGCATCAGGTACTCAAGGCGGAAAATG GCGCCGACGGCGTGGCCCTGGCTCGCCAGGAAAAGCCGGACGTGGTCCTGATGGACATCGTCATGCCCGGGCTGAACGGCTTCCAGGCCACCCGGCAGCT GTCCAAGGACCCGGAAACCAGTGCCATCCCGGTCATCATCGTCACCACCAAGGATCAGGAAACCGACAAGGTCTGGGGCAAGCGCCAGGGCGCGCGCGAC TACCTGACCAAGCCGGTCGACGAAGACACCCTGCTCAAGACCATCAATGCAGTGCTGGCCGGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
AGCCGGACGGCGCGCTAATAACTATTAGAAAAAAGGCCAGGGCCGGCATGTCGGAAGTCCAGACTCCCTTCCAGCTCCTCTATGAAATCGACCAGCGTTG CCGCCTCCTGGCTGCGGGCCTGCCCGCGCAGCGCGAGGTCGTGCAGAGCTGGAACGGTATCGGCTTCCGCATGGCGGGCCGGCTGTTTGTCGCACCCATG GGCGAGGTCGCCGAGGTTCTCCATGAACCCCGCTACACCTTGCTGCCGGGCGTGCGCGACTGGGTAAAGGGCGTGGCCAACGTGCGTGGCCGCCTGCTGC CGATCATGGACCTGTGTGGCTTCCTCGGTGCCGAACTGTCGGCCCTGCGCAAACAGCGTCGGGTGCTGGTGGTCGAGCATGGCGAGGTATTCGCCGGACT GATCGTCGACGAAGTATTCGGTATGCAGCATTTCCCGGTGGATACATTCAGCGAACAGCTGCCACCTCTGGAGGCCGCGCTGCAGCCATTCATCCATGGT
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Amino Acid Sequence |
>chemotaxis protein CheY
MARILIVDDSPTEMYKLTAMLEKHSHQVLKAENGADGVALARQEKPDVVLMDIVMPGLNGFQATRQLSKDPETSAIPVIIVTTKDQETDKVWGKRQGARD YLTKPVDEDTLLKTINAVLAG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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