Strain | Pseudomonas kilonensis strain 1855-344 contig7, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GAATGGCGGATCCTTGCGCATCAGGATCACGTCCAGGTCGCTGAGCAGCGCGTCGCTCTCGGTGCCCAGCTCAAACCACTTCTCGGGGTTGGCGAAGACT TTCAGCGGTTTCATCCGCGCCCGAGCCTGGCCTTCGGCCTGGTAGAGGTCGCGCTGCTCCATGTAGAACAGCTCCCAGCCGCGCTTCTGAGCGGCCAGCA GCATGGCCAGCGAGCTATCCTTTTTATAGGAAATGCTGGCGATAGGGTCCATGACAATGCCGACGCGTACGCTCATGGCTTGGTTCCTCGAAATGTGATG GGCACATATTGGTGCGAAAAAGTGGCGTCAGAGTGGCGCCCGGAAGATTGGCGGTCAAGGAAAAACCACCGCGCCGAGCGGCCGATAGATCGGCGATGGA GACTGTGCTAAAAAGGCTGCCATGTGACGTGCGGGCCTTGAACATCAAGGGTTTGCGCTGTCGATCACACTTACGCGTTAAAAACCGGTTCGCAGTGGCA
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DNA Sequence for Gene |
>VP02_RS09955
ATGGCAGAGCATCTCACGCAGCAGCAACCCAGCGCCTTGAAGGTCATGGTCATCGACGACTCGAAGACCATCCGCCGCACCGCCGAAACCTTGCTGCGCA ACGTGGGCTGCGAGGTGATCACGGCCGTCGATGGCTTCGATGCCCTGGCCAAGATCGCCGACCATCATCCGGGCATCATTTTTGTCGACATCATGATGCC GCGCCTGGATGGCTACCAGACCTGTGCCCTGATCAAGAACAACAGCGCGTTCAAGGCCACGCCGGTGATCATGCTGTCGTCCCGCGACGGGTTGTTCGAC AAGGCCAAGGGACGCATCGTCGGTTCCGATCAGTTTTTGACCAAGCCGTTCAGCAAGGAAGAACTGCTGGGGGCGATACAGGCCCATGTCCCGGGCTTTG CCGCTGTCCAGCCGCACCAGGCACATTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TGACACTTGGCCAACGGGCCTGGGGTCAACAAGAAAATGGGGAACACCATGGCACGAGTTCTGATCGTCGATGATTCGCCGACTGAAATGTACAAACTGA CCGGCATGCTGGAAAAGCACGGCCATCAGGTCCTGAAGGCCGAGAATGGCGCCGATGGCGTGGCCCTGGCCCGCCAGGAAAAACCCGATGCGGTGCTGAT GGACATCGTCATGCCCGGCCTCAACGGTTTCCAGGCCACGCGCCAGTTGACCAAGGACCCGGACACCGGCCACATCCCCGTGATCATCATCACCACCAAG GACCAGGACACCGACAAGGTCTGGGGGACGCGCCAAGGGGCGAAGGACTACCTGACCAAACCGGTGGACGAAGAAACCCTGATCGCGACCCTGAACAAAG TGCTGGCTGGCTGACGGCGCGGCCATGAGCCAATCCCTGACCGCATTCGAACTGCTGCTGCAGATCGACCGGCGCTGCCGGTTGCTGGGGGCGGACCTGC
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Amino Acid Sequence |
>pilus modification protein PilG
MAEHLTQQQPSALKVMVIDDSKTIRRTAETLLRNVGCEVITAVDGFDALAKIADHHPGIIFVDIMMPRLDGYQTCALIKNNSAFKATPVIMLSSRDGLFD KAKGRIVGSDQFLTKPFSKEELLGAIQAHVPGFAAVQPHQAH
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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