Pseudomonas kilonensis 1855-344, VP02_RS29860
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas kilonensis strain 1855-344 contig50, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GATCACATGAAAGACGACGCGGCCAACTTCCCCGACCCGGCCGACCGTGCGAGTCAGGAAGAAGAGTTCAGCCTCGAGCTGCGCGCCCGTGATCGCGAGC GCAAGCTCATCAAGAAAATCGACAAGACCCTGCAACTGATCGAAGACGAAGAATACGGTTGGTGCGAGTCCTGCGGCGTCGAGATCGGCGTCAAGCGACT GGAAGCCCGTCCGACCGCCGACATGTGTGTCGACTGCAAGACCCTGGCGGAAATCAAGGAAAAACAGGTCGGCAAATAATCGCCTGGGCTGTCACCGAAA CGGAGCGTACATACGCTCCGTTTTTTGTTTCCGATACTTTCAATATCCCTGTGGGAGCGAGCTTGCTCGCGATAGCAGTGGGTCAGCCAGCCTCGATGTG ACAGATACACCGCTATCGCGAGCAAGCTCGCTCCCACAGGGGATATGCTTGGGCATCAAGATTTGTATTCCTACCGCTCAGACTCAATAACATTCGCCCT
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| DNA Sequence for Gene |
>VP02_RS29860
ATGACTGCCACCGCCCCCTACATCGGACGCTTCGCCCCCACCCCCAGCGGCCACTTGCATTTCGGTTCGCTGGTCGCCGCCCTGGCGTCGTACCTCGATG CCCGGGCCGTGGGCGGACGCTGGTTGCTGCGCATGGAAGACCTTGACCCTCCGCGGGAAGAACCGGGCGCGCAAGCGGCGATTCTCAAGGCACTGGAAAG CTACGGGTTTGAATGGGACGGCGAGATGATTCGCCAAAGCGAGCGCCATGACGCCTACGACCAGGTGATCAACCGGCTGTTCAGCCAGGGCCTGGCCTAT GCCTGCACCTGTTCGCGCAAACAATTGGAGGCGTACCAGGGCATTTATCCGGGACTGTGCCGCAACGCCGGGCACGGCACCGAGGACGCCGCCATCCGCC TGCGCGTCCCCGAACTTGAGTACCACTTCACCGACCGGGTCCAGGGCGAGTTCCGCCAGCACCTGGGCCGCGAGGTCGGCGACTTCGTGATCCGCCGCCG CGACGGGCTCTACGCCTATCAATTGGCCGTGGTCCTGGACGACGCCTGGCAAGGGGTGACCGATATCGTGCGCGGCGCCGACCTGCTGGACTCCACACCG CGCCAGCTCTACCTGCAAGAACTGCTTGGATTGCCGCAACCGCGTTACCTGCACGTGCCGCTGATCACCCAGCCCGACGGGCACAAGCTCGGTAAATCCT ACCGCTCACCGCCCCTGGCAGCCGATCAGGCCACGCCATTGTTGTTACGGGCGTTGCGCGCGCTGGGCCAGCAACCGGGCCTCGAACTGGTCGATGCCAG CCCACGGGAACTGCTGGCCTGGGGCATTCGCCACTGGGACGCGGGCAAGATCCCGCGCACACTGAGCCTGCCCGAAGCGCAAATACGTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CGGCCCTTGCAGCTTGGCGCCCATCCGTTACCATCGCCGCACGATTTTTGGGCACGCGCATAAATTAGAGAGGCCGGGATGTATATCTATCGCTTGGTCC TGCTCCTGGTAGTGGGGATTTATCTGTTCTCCCCGGCCATCATGGATTGGTGGATCGATGCCACGGGTGCCTGGTATCGGCCGTATCTGCTCTGGCTGAT CCTGATTGTCGTGACCTTCATCCTGCAGAGCCAAAAAGATGCCGATGAGCTTTAGCCTGACCCAGATGATCCTGATCAGCGCCGCCTACCTGGCCGTGCT GTTCGGCGTAGCCTGGATCAGCGAACGAGGCATGATCCCCCGGGCGATCATCCGCCACCCGCTGACCTACACCCTGTCGCTGGGTGTCTATGCCAGCGCA TGGGCGTTCTATGGCACGGTCGGGCTGGCCTACCAGTACGGCTATGGCTTCCTCTCCAGTTACCTCGGGGTTTCAGGGGCGTTCCTGCTGGCGCCCGTGT
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| Amino Acid Sequence |
>glutamyl-Q tRNA(Asp) ligase
MTATAPYIGRFAPTPSGHLHFGSLVAALASYLDARAVGGRWLLRMEDLDPPREEPGAQAAILKALESYGFEWDGEMIRQSERHDAYDQVINRLFSQGLAY ACTCSRKQLEAYQGIYPGLCRNAGHGTEDAAIRLRVPELEYHFTDRVQGEFRQHLGREVGDFVIRRRDGLYAYQLAVVLDDAWQGVTDIVRGADLLDSTP RQLYLQELLGLPQPRYLHVPLITQPDGHKLGKSYRSPPLAADQATPLLLRALRALGQQPGLELVDASPRELLAWGIRHWDAGKIPRTLSLPEAQIR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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