Pseudomonas kilonensis 1855-344, VP02_RS08160
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas kilonensis strain 1855-344 contig5, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GCAAGGACGCCCGCCAGGTGCCGGACACTCCCTGCCCGTGGCTCGACGGCCTGTACATCAACAGCGGCCACGGCTCCCGCGGCCTGATCACCGCGCCGCT GTCGGGCGAACTGATCGCCGCCTGGCTGGACAACGAACCCCTGCCCCTGCCCCGCAGCGTGGCCGAAGCCTGCCATCCGAACCGGTTTGCGTTGCGGGCA TTGATTCGGGGCAAGGCCTAACACCCATTTAATGGTGTGCCCCCATCCCCTGTGGGAGCGAGCTTGCTCGCGATAGCGGTGGATCAGTTGGCATCTGAGT TGACTGACCCACAGCTATCGCGAGCAAGCTCGCTCCCACAGGTTCCTCTTATCCCGTGAGGCATGGGGCAACCCCCTACCCGCCGGCTTATAACGCATCG ATCTAAAACTCACAGCAATCCCTCCGGTCAGTTTCAGGGTACCCGCCCTTTTGGCGGGTGCGGCTTGACCCCTCCCCAACGGAAAAACCGGTAAGGACTT
|
|
| DNA Sequence for Gene |
>VP02_RS08160
ATGTGCGGATTAGCTGGAGAGTTACGTTTCGATCAACAACCTGCGGACCTTGCGGCCGTAGAGCGAATCACCCATCACCTGGCCCCTCGCGGCCCCGACG CCTGGGGTTTTCATAGCCAGGGGCCAATTGCCCTGGGCCATCGGCGCCTGAAAATCATGGACCTGTCGGACGGCTCGGCCCAGCCGATGATCGATAATCA GCTGGGCCTGTCCCTGGCTTTCAACGGCGCGATCTACAACTACCCGGAACTGCGCAGCGAGCTCGAAGGCCTGGGCTACAGCTTCTATTCCGGGGGTGAC ACCGAAGTGCTGCTCAAGGGCTATCACGCCTGGGGCGAAGCGCTGCTGCCCAAGCTCAACGGCATGTTCGCCTTCGCCATCTGGGAGCGCGATGCCAAGC GGCTGTTCATCGCCCGCGACCGCCTCGGCGTCAAGCCGCTGTACCTGTCACGCACCGGCCAACGGCTGCGTTTCGCCTCGGCGTTGCCGGCGCTGCTCAA GGGCGGCGACATCAACCCGATGCTCGACCCAGTGGCTCTCAACCATTACCTGAATTTCCACGCGGTGGTCCCGGCACCCCGCACCTTGCTGGCCGGTGTT GAAAAACTGCCGCCCGCCACCTGGATGCGCATCGAAGCCGACGGCAGCACCGAGCAGAAAACCTGGTGGACCCTGCCTTACGGCCCTCGAGCCGACGAAC AGCACCTGAACCTGGAAGACTGGATCGATCGCGTGCTCGACAGCACCCGTGAAGCGGTCGCCATTCGCCAACGCGCCGCCGTGGATGTCGGCGTGCTGCT TTCAGGCGGCGTCGATTCAAGCATGTTGGTGGGTCTGTTGCGGGAAGTGGGCGTGGAAGACCTGTCCACATTCTCCATCGGTTTCCAGGATGCCGGCGGC GAGCGCGGTGACGAATTCCAATATTCGGACCTGATCGCCAAGCACTACGGCACCCGCCACCACCAACTGCGCATCGACGAAAAAGAAATCATCGAGCAAC TGCCGGCAGCGTTCCGCGCCATGAGCGAGCCGATGGTCAGCCACGACTGCATCGCCTTCTACCTGCTGTCGCGGGAAGTGGCCAAACACTGCAAAGTGGT GCAAAGCGGCCAGGGCGCCGACGAGCTGTTCGCCGGTTACCACTGGTACCCGCAGGTCGATGGCGCCAGCGATCCGTACGCGGCCTATCGCGCCGCGTTC TTCGACCGCAGCTACGAAGAATATGCCGCCACCGTGCAGCCCAAATGGCTGACGGCCAACGACGCGGCCGGTGATTTCGTCAAAGAACATTTCGCCCAGC CCGGGGCCGATGCGGCGGTAGACAAGGCCCTGCGCCTGGACAGCACCGTGATGCTGGTGGACGACCCGGTCAAGCGTGTCGACAACATGACCATGGCCTG GGGCCTGGAAGCGCGCACACCCTTCCTGGACTACCGCCTGGTGGAACTCTCGGCGCGGGTCCCAGCGAAGTTCAAACTGCCCGATGGCGGCAAGCAGGTG CTCAAGGAAGCCGCCCGACGGGTGATCCCCGGCGAGGTGATCGACCGCAAGAAAGGCTATTTCCCGGTGCCAGGCCTCAAGCACCTGGAAGGCAACACCC TGGCCTGGGTTCGCGAGTTGCTGCTGGACCCGAGCCAGGACCGCGGCCTGTTCAACCCGGCCATGCTCGACCGCCTGCTGACCGACCCCAACGGCCAGCT CACGCCGTTGCGCGGCTCGCGGCTGTGGCAACTGGCGGCGCTGAACCTGTGGCTCAGCGAGCAAGGAATCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
TCGATGAAACCTCATGCAACGGTTCACAACCAACGCCTCTTGCGCGGCCAGGCCCCCTCCTATGAACGCCTGCAGGCACGCCTGGCCGAAGACGGCAGCG AGTTGGGTGCCGACCCGATCGCAGTGCATTGCGGCTGGGGCCGACTGTTGATCGGCCACACCTTCCCGGACCCGGCAAGCCTGGCCCAGGAACTGCTCAA CGAACAACCCGGCGAACGCGACATTGCCTTGTACGTGGCCGCGCCCCAGCAAGTACTGGGGCTGGAACCGGCACAACTGTTCCTCGATCCGTCCGACACC TTGCGCTTGTGGTTCAGCGACTATCGCCAGTCCACACGGGTGTTTCGCGGTTTCCGGATTCGCCGGGCCCAGAGCGAGACCGACTGGCAGGCCATCAACC AGCTCTACCAGGCCCGGGGCATGCTGCCCATCGACCCGCTGCGCCTGACCCCGCGTCATGAGGGCGGCCCGGTCTACTGGCTGGCCGAAGATGATGACAC
|
|
| Amino Acid Sequence |
>asparagine synthase
MCGLAGELRFDQQPADLAAVERITHHLAPRGPDAWGFHSQGPIALGHRRLKIMDLSDGSAQPMIDNQLGLSLAFNGAIYNYPELRSELEGLGYSFYSGGD TEVLLKGYHAWGEALLPKLNGMFAFAIWERDAKRLFIARDRLGVKPLYLSRTGQRLRFASALPALLKGGDINPMLDPVALNHYLNFHAVVPAPRTLLAGV EKLPPATWMRIEADGSTEQKTWWTLPYGPRADEQHLNLEDWIDRVLDSTREAVAIRQRAAVDVGVLLSGGVDSSMLVGLLREVGVEDLSTFSIGFQDAGG ERGDEFQYSDLIAKHYGTRHHQLRIDEKEIIEQLPAAFRAMSEPMVSHDCIAFYLLSREVAKHCKVVQSGQGADELFAGYHWYPQVDGASDPYAAYRAAF FDRSYEEYAATVQPKWLTANDAAGDFVKEHFAQPGADAAVDKALRLDSTVMLVDDPVKRVDNMTMAWGLEARTPFLDYRLVELSARVPAKFKLPDGGKQV LKEAARRVIPGEVIDRKKGYFPVPGLKHLEGNTLAWVRELLLDPSQDRGLFNPAMLDRLLTDPNGQLTPLRGSRLWQLAALNLWLSEQGI
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|