Pseudomonas kilonensis 1855-344, VP02_RS06185
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas kilonensis strain 1855-344 contig4, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GGGCTCCGAGGAACTGGCCAACGACGTGTTGCATGAAACCTACCTGCGGGTCGATCGCATGATCGATACCCAGGAGATCGCCCAGCCCAACGCTTATTTG TATCGCATGGCCCTGAACATCGCCGCCGACCGTCGACAGGCCGATGCACGCCTGCTCACCGGGGATGAAGTCGAGGAATTGCTGCAGGTCTCGGATGAAG CGCTGGATCCGGCCCGTGTGGTGGGCGGGCAGAAGGAGCTGCAGACCCTGCTCAAGGCCTTGTACGAACTGCCGGCGCGCCGTCGCAGGATTTTCATCGC CGCGCGCCTGGAGGAAGCGCCGCACCTGGAAATCTCCCAACGCTTCGGTATTTCCACGCGCATGGTGGAGAAGGAAATCAAGGCTGCGTTGGGGCACTGC GCCCTGCGCCTGGAAAGAAAAGTCATTCAGCGGTTCGGTCCCGGCGCGGGAAAACCGTCTTGAGAGTAGAGACCCGACCCTTTCGTGAGTGTGTGTGCGC
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| DNA Sequence for Gene |
>VP02_RS06185
TTGAACATCTTCAGCATCACTTCCCCTGACGCCACGCCCCAGGCCCGATTGGCCAGCGAGGCCCGAGACTGGCTGATCCTGCTGACCTCGGGGCGCGCCA CCGTGGCCGATGCCCGGGCCTTGCGCCTGTGGTGCGGGCAAAGCCCCGAACATGCCCGGGCCTTCGAACAGGCCAAGGCGCTGTGGCAGGGGCTGCAACC TGCCGCCGCAGCGGTGCAGGCGCCCCGGCATTTCGGCCGTCGGGCGTTGCTGGGTGGCGCCATCGCGGCGTCGGCGGCGTTCCTGTTGATCCGCGCCACG GTGCCCGGTGGTGTTTCCGGGCTGGGAGCCGACTACGTCACCGATGTCGGCGAACAGCGCCGAGTGGAACTGGCCGAGGGCGTCAGCCTGGAACTCAATA CCCAGACCCGCCTCAGTCGCCGCGCGCTGGCCGATGGCGGACAAGGACTGGAATTGCTCAGCGGTGAGATTGAAGTGCAGGGGCGCAGTGCCCAGGTGGT CAGCGTCCAGGCCGGTGCCGGCTGGATCAGCGCTGCCCGGGCACGCTTCAACATCCGCTACACCGACCACAGCGTCTGCGCGACTTGCCTGGAGGGCGTG GTGCAGGTCGAGGTGCAAGGCCAGCGGTTCCGCCTGGAGCCGGGCATGCAACTGACGTACGACCCTGGCCGGGTGGGCGCTCCCAAGCGTGCCGATGTGT CGGCAGCGATTGCCTGGCGTGAGCAGGTCCTGGTGTTCAACGACGCGACCTTGGCCAGTGTCATTGATGAGATAAACCGCTATCGGCCAGGCATGTTGCT GCTGCTCAATCGCGAGCTCGGCCAGCGCAAGGTCCAGGCGCGGTTTCGCCTCGACCAACTGGCGGGCGTGGCACTGTTGATCCGCGATGCCTATGGTGCC AAATGCACTGAATTGCCGGGTGGGGTGGTGGTGCTGAGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGCCAGTGGCGCCTGGGCGGGCCTCATCGCGAGCAGGCTCGCTCCCACAAAGGCCCGGTGCTTGGCCCAAATCTAGAGTTCACCCAATATCCCTGTGGGA GCGAGCTTGCTCGCGATAGCGATGGGTCAGCGACATTGAACTTGACTGATACACCGCCATCGCGAGCAAGCTCGCTCCCACAATGGAACCTGTGCTGTGC CAAACCATGAAGGTCACCCAATAATCTGGGGGGGCTATTCCAATGGCCCCAGCACCTGTCGATATTTCTCTACGCCCTGAGGCGTCTGGCGGGTCAAGCT GATTTCGATGCCCATCGGGTTTTCCTGGCGGTTGGCGCTGAGCTTGCGCCAGCCTTTTTCCTTGTCCCAGAACCGCAGTCCGGCGTCGCTGACGTCACTG AGCACCGCCACGCCCGGGCCGGGTGCGGGCAGTGGGTAGCGACTGCGGGCCTGGCCTTGGGCGCGGTAAAGCGTGTCGCCCTTGAGCCACCAGCGCACCC
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| Amino Acid Sequence |
>iron dicitrate transport regulator FecR
MNIFSITSPDATPQARLASEARDWLILLTSGRATVADARALRLWCGQSPEHARAFEQAKALWQGLQPAAAAVQAPRHFGRRALLGGAIAASAAFLLIRAT VPGGVSGLGADYVTDVGEQRRVELAEGVSLELNTQTRLSRRALADGGQGLELLSGEIEVQGRSAQVVSVQAGAGWISAARARFNIRYTDHSVCATCLEGV VQVEVQGQRFRLEPGMQLTYDPGRVGAPKRADVSAAIAWREQVLVFNDATLASVIDEINRYRPGMLLLLNRELGQRKVQARFRLDQLAGVALLIRDAYGA KCTELPGGVVVLS
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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