Pseudomonas kilonensis 1855-344, VP02_RS27220
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas kilonensis strain 1855-344 contig38, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
AATGCCCTGGCGACCTTGGCGGCGGCCCGGCATGTCGGCGTGGTGCCGTCCATGGGCATTGCCGCGTTGAGCGCGTTCAAGAGCGTGAAGCGGCGGATGG AGAAGGTCGCCGAAGTGCGCGGTATCACCATCTATGACGACTTCGCCCATCACCCGACCGCCATCGCCACGACCCTCGACGGTTTGCGCAAGCGCATCGG CGATGCGCCGCTGATTGCGATCATCGAGCCGCGTTCCAACTCCATGAAGCTCGGCGCGCACCGTGATGGCCTGCCGGAAAGCGTGGTCGATGCCGACCAG GTGATCTGGTACGCGCCGGCCAACCTCGGCTGGGACCTCGGCGCCACTGCGGCGCTGTGCACGGTGCCGTCGATTGTCAGCGATTCCCTGGAAGGCATCA TCGAGCGCGTGAAGAGCCAGGCCCAGCCCGGTACTCATGTGGTGATCATGAGCAACGGCGGCTTCGGCGGCCTGCACGGCAAACTGGCCGAGGCCCTGAA
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| DNA Sequence for Gene |
>VP02_RS27220
ATGAGCAATGGCTCCGAACGCATCACGCTGGCGATGACCGGTGCGTCCGGCGCCCAGTACGGCTTGCGCCTGCTCGATTGCCTGGTGCGTGAAGACCGCG AGGTACACTTCCTCATCTCCAAGGCCGCGCAACTGGTGATGGCCACCGAGACCGACGTGACCCTGCCGTCCAAGACCCAGATGATGCAAGCCTTCCTCAC CGAATACACCGGTGCGGCGGCGGGGCAGATTCGCGTGTATGGCAAGGAAGACTGGATGTCGCCAGTGGCCTCGGGCTCCGGCGCGCCGGCCGCCATGGTG GTGGTGCCGTGTTCCACCGGGACGCTGTCGGCGATTGCCACCGGGGCCTGCAACAACCTGATCGAACGGGCGGCGGACGTGACGCTCAAGGAACGCCGCC AGTTGATCCTGGTGCCGCGGGAAGCGCCGTATTCGAGCATTCACCTGGAGCACATGCTCAAGCTGTCGAACATGGGCGTGACCATCCTGCCGGCCTCGCC GGGTTTCTATCACCAGCCGCAGACCATTGATGACCTGATCGATTTCGTGGTCGCGCGGATCCTCAATCTGCTGAACATCCCCCAGGACATGTTGCCGCGC TGGGGCGAACATCATTTGAGCAGCGATGAATAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCTGCTGATTGTGCTGCTGGCGCTGCAGCTGACCGGCTGCGCCACCGCCCGCACCCTCGACGCCGCCAAGCCTGGCGCGCCGGTGGTGTACGCCGGGACA CGCCTGGATCTGTACGCCCTCAACGGTGGTTGCTGCGCCAAGGACCGCTTTGGTGCCGAGGCACCGCGTTACCCGGGGCTCGATCTGCCGGGCAGTGCGC TGCTCGATACCTTGTTGTTGCCGTTGTCGTTGTTTACGGCGATAGGTGTGGGGTTTCAGGCTACGGGCGGGCTGTAACGAACATCACGGTGCCTTGGTCT GCCCGGAACCTGTGGCGAGGGAGCTTGCTCCCGCTGGGCTGCGAAGCGGCCCCAAGTTTCTCCCCTGAAACCCAAGGCGACTGCTGCGCAGTCGAGCGGG AGCAAGCTCCCTCGCCACAATGGGGGTCTGGTCTTGGATTGGGGGTGCTCGCGATGGCGCCCGCTCAGACGCCGCAATCATTTGCCGAGCTTGCGCAACT
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| Amino Acid Sequence |
>aromatic acid decarboxylase
MSNGSERITLAMTGASGAQYGLRLLDCLVREDREVHFLISKAAQLVMATETDVTLPSKTQMMQAFLTEYTGAAAGQIRVYGKEDWMSPVASGSGAPAAMV VVPCSTGTLSAIATGACNNLIERAADVTLKERRQLILVPREAPYSSIHLEHMLKLSNMGVTILPASPGFYHQPQTIDDLIDFVVARILNLLNIPQDMLPR WGEHHLSSDE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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