Strain | Pseudomonas kilonensis strain 1855-344 contig34, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CCTGTTCGATGGCTTCCCACGCACCATTCCCCAGGCCGAAGCCCTGGTGACGGCTGGTGTCGAGTTGGATGCGGTCGTTGAAATTGCCGTCGAAGACGAG GAAATCGTCCAGCGCATTGCCGGTCGCCGCGTTCATGAGCCTTCCGGCCGCGTTTACCACACCGTCTACAATCCGCCGAAAGCCGAAGGCAAGGATGACG TGACGGGTGAAGACCTGGTGCAGCGCAAGGACGACACCGAAGAAACCGTGCGTCATCGCCTGTCGGTCTACCATTCCCAGACCAAGCCGCTGGTGGACTT CTACCAGAAACTGTCGGCTGCCAATGGCAAGCCGAAATACAGCCATATCGAAGGCGTCGGTTCGGTCGAAGCGATCACTGCCAAGGTGCTTGCAGCCTTG AGCTGAAAAGTCTGATCAGTTGCATCAACTACGGCCCGCTTGCGGGCCGTAGTTGTTTATACTGGCGCACTTTTTTTCCACCTGATTTACGGACACATCG
|
|
DNA Sequence for Gene |
>VP02_RS25925
ATGAGCACCTTGCTGGCCCTGGACACCGCGACTGAAGCTTGCTCCGTTGCCTTGCTGCACGACGGCAAGGTCACGAGCCATTACGAGGTGATCCCGCGCC TGCATGCGCAGAAACTGTTGCCGATGATCCAGAAACTGCTGAGCGATGCCGGGACGACCTTGCAGGCAGTGGACGCGATTGCCTTCGGTCGCGGGCCGGG GGCTTTTACCGGCGTACGCATCGCCATCGGCGTGGTGCAGGGGCTGGCGTTTGCCCTGGAGCGGCCGGTGTTGCCAGTGTCGAACCTGGCGGTGCTGGCC CAGCGCGCCTTGCGCGAACAGGGCGCTCGCCAAGTCGCAGCGGCCATCGATGCGCGCATGGACGAGGTGTACTGGGGCTGCTATCGCGAAACCGACGGCG AGATGCGCCTGGTCGGTGCTGAAGCGGTATTGCCGCCCGAAGCGGCGGCGTTGCCGAACGACGCCAGCGGCGATTGGTTCGGCGCCGGTACCGGTTGGGG CTACGGCGAGCGCATCGCCGTCAACCTGGCCGGCCAGGACGCATCCCTGCTGCCTCACGCCGAAGACCTGCTGGCCCTGGCCCGCTTCGCCTGGGCCCGT GGTGAAGCCATCCCGGCCGATGATGCGCAACCCGTTTACTTGCGGGACAAAGTCGCCACGCCAAAGTCCGAGCGATAA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
AAAGCATCACTCCGCTTTCAAGCGGGCAGCGTTGTGGCGAGGGAGCTTGCTCCCGCTGGGGCGCGAAGCGGCCCTAGAACCTCGCTCGCATCGTTCTGGT CCAGGTTTTGGGGCTGCTTCGCAGCCCAGCGGGAGCAAGCTCCCTCGCCACAAAGGCATGGGGTCTTCCCAAAAACGGTGTTCTCGCAAAAAGTCATTTT CGCCTCTAAAAGTCACACCCAATATTGCCAGTCGTCACTTTTTCAGCCCGTTTTTAAACCTTTTAGGCTTTATGTGTTCTAGTTATCACTTGCGCATTTG CGCGGCTGCGAAAGTGCCGCTAAATTGCCATCATTGATACCGAGCATTCTGTTATGCGTATAGACGGCGTTTCATCCCAGTCCTATCCCATCAAGCGCAA GCCTCGTGCAGGCAAAATCGCTGAGCAAGAGTCCTTCGATGATGATATCGATGGCGAACTGGAGTTCCCGTCTGAAGAGCAACTGGCCGCCCGCGCCGCC
|
|
Amino Acid Sequence |
>peptidase M22
MSTLLALDTATEACSVALLHDGKVTSHYEVIPRLHAQKLLPMIQKLLSDAGTTLQAVDAIAFGRGPGAFTGVRIAIGVVQGLAFALERPVLPVSNLAVLA QRALREQGARQVAAAIDARMDEVYWGCYRETDGEMRLVGAEAVLPPEAAALPNDASGDWFGAGTGWGYGERIAVNLAGQDASLLPHAEDLLALARFAWAR GEAIPADDAQPVYLRDKVATPKSER
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|