Pseudomonas kilonensis 1855-344, VP02_RS04715

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas kilonensis strain 1855-344 contig3, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CAAAGCCCCGGTTTATGGGGTTTTTGAAAATGGCACGACGCTTGCTTTAGCCGTCGTACGTACATTCTGGTCACCCAAAGGTTTCCGACATGAGCATCAG CTTCGATAAAGCGCTCGGTATCCACGAACAGGCCCTGAGCTTCCGCGCCCAGCGCGCCGAAGTCCTGGCCAACAACATCGCCAACGCCGACACCCCGAAC TTCAAGGCTCGGGACCTGGACTTCTCCAAAGTGCTCGCCGAGCAGAACGAGAAGGCCAAGAACGGCCACTTCGCCTTGAACATGACCAACAGCCGTCATA TCGAAGCCGAAGGCTTGGGCAATGGCGATGAATCGCTGATGTATCGCACGCCGATGCAACCTTCGATCGACCAGAACACCGTGGACGCTCAACTGGAACA GTCCAACTACACGGAAAACTCCGTGAACTTCCAGGCCAGCTTCACCCTGCTCAACAGCAAGTTCAAAGGGCTGGTATCGGCCCTGCGCGGAGAGTAAGCC
DNA Sequence for Gene
>VP02_RS04715
ATGTCGATTGCTAGCGTATTCAACATTGCCGGCAGTGCCATGAGTGCCCAGACCACTCGCCTGAACACCGTCGCCAGTAACATCGCCAACGCCGAGACCG TTTCCTCAAGCATCGACCAGACCTACCGCGCTCGCCACCCGGTATTCGCCACCATGTTCCAGGGCGGCCAGTCCGGCGGCAGCGACTCGCTGTTCCAGGA GCAGGACGCGGCCGGGCAGGGTGTACAGGTGCTTGGCGTGGTCGAAGACCAGAGCAACCTCGATGCCCGTTATGAGCCAAACCATCCGGCTGCCGACGCC AAGGGTTATGTCTACTACCCGAACGTCAACGTCGTCGAAGAAATGGCCGACATGATTTCCGCCAGCCGTTCGTTCCAGACCAACGTCGAAATGATGAACA CCGCCAAAACCATGATGCAGAAGGTCCTGACCCTCGGTCAGTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TAAGGGGCGAGTCACATGAGCGTTACCAGTACAACCAGTGGTTTGAGCCTCAACGAGATTCTGGCCAACTCCTCGGTCAAGACCAACACCACCACCGATG GCCTGTCCTCGGCGACGAGCTCGGCCACGGGGTCGCAGTCGCTGGGCAAGGATGCGTTCCTGCAATTGCTGGTCACCCAGCTGAAAAACCAGAACCCGCT GGAGCCGCAGGATAACGGCGAGTTCGTTGCCCAGCTGGCGCAGTTCAGCAGCCTGGAAGGCATCACCACCCTCAACGACACCGTGAGCGGTCTCGCCAGC AACTACAACTCGTCCCAGGCCTTGCAAGCCTCGTCACTGGTGGGCCGCTCGGTCATCGCCCCGGGCGACAAGGCGGTGGTCGATACCTCCAAGAGCCTCA ACGGGACCGTGGTGGTACCGACATCGGTGTCTTCCGTCGCCGTCAAGATCGTGGACAAGGACGGCAAGACCGTTCGCACCATTGACCTGGGCAGCCAGAA
Amino Acid Sequence
>flagellar basal body rod protein FlgC
MSIASVFNIAGSAMSAQTTRLNTVASNIANAETVSSSIDQTYRARHPVFATMFQGGQSGGSDSLFQEQDAAGQGVQVLGVVEDQSNLDARYEPNHPAADA KGYVYYPNVNVVEEMADMISASRSFQTNVEMMNTAKTMMQKVLTLGQ
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site