Strain | Pseudomonas kilonensis strain 1855-344 contig19, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GGGCAAGGCCCCGGGGCTTTCATCTGGTGACGGAAGAGTTGCTTGCCGGCCTGCCTGAACTCCAGGCGTGTCGTGTCGGTCTGTTGCATCTGTGGCTGCA GCATACCTCGGCTTCGTTGACCATCAACGAGAACGCCGATCCGGCGGTACGTCGAGACTTCGAACGATTTTTCAATCGGCTGATCCCACAAGGAACCGCC GACTATGAGCACAACGACGAAGGCCTGGACGACCTCCCGGCGCACTTCAAGGCCAGTGTGCTCGGTTGCCAGGTCAGCCTGCCGGTCACGGCAGGACGGC TGGCATTGGGTACCTGGCAAGGTGTTTATCTGGGCGAGCACCGTGATCAGGGCGGTGCTCGTAAAGTCCTCGCCACCTTGTACGGTGAAGGGGCATAACC GCTGATTGCCGGCGGATGTTGAATTTTTTCTGGCAGCCTTCGAACAGATGGCGAAGCTGGGCTATAACTAATCTGCTTTTCGCAAGTCATGAGGTAGAAC
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DNA Sequence for Gene |
>VP02_RS18820
ATGAGCGACGATGATCTGGAAAACGACGACCTCGAAGTAGGCGACGAAGACGAGACCGAAGAAGGCCTTGAAGCGGCAGCGGAAGACGTTGCCGACGACG ATGGGGCCGATGTTCCGGCGCCTACCGCCAAAGGCAAGGCCAAGGCAGCCGTATCGGTTGACGAGTTGCCGAGCGTAGAGGCCAAGAACAAGGAGCGTGA TGCGCTCGCCAAGGCCATGGAGGAATTCCTGGCCAGGGGCGGTAAGGTGCAGGAAGTGGAGGCCAACGTGGTCGCTGATCCGCCCAAGAAGCCTGACAAC AAGTACGGTAGCCGCCCTATCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GTATCGGCTTCATTGCTTGCTGAAAAAGCCCGCCGTCGCTGCGGGCTTTTTCATGGGTGCGATTCCATTCCCGGGCCAGGCGCAGTCCCTGTGGGAGCGG GCTTGTTCGCGAAAGCGGTTTATCGGTCACATCAATGCTGGATGTGCCACCGCCTTCGCGGGCAGGCCCGCTCCCACGGAGGTTGTAGGGCTACAGGGCG GGGTTCAGTGCTGGCGATGCCACCCTGCCAATAACCCCGGCAGTTCGGTCAGGCTGCGGATTTCGGCATCCGGCGCGTGGTCGGCATCCCAGGGTTTACC CGTCGGGTTGAACCATACGGCGCGCAGGCCGGCCTGTTGGGCGCCGGCGATGTCGTCGCCCGGGTGATCGCCAATGTGCACGGCGGTCTGCGCCGTGGCG CCGCCGCGTTGCAGGGCTTCGTGGAACAGCCGGGCGTCAGGCTTGGCGATGCCGATGTCTTCGGCGCACAAGGCGAACTTGAAATAGTCCGCCAACCCCA
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Amino Acid Sequence |
>hypothetical protein
MSDDDLENDDLEVGDEDETEEGLEAAAEDVADDDGADVPAPTAKGKAKAAVSVDELPSVEAKNKERDALAKAMEEFLARGGKVQEVEANVVADPPKKPDN KYGSRPI
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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