Pseudomonas kilonensis 1855-344, VP02_RS17655

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas kilonensis strain 1855-344 contig17, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TCGACAACCAGGTCAACCCGCAGACCGGCACCATTCGCGGTCGCGCCGTGTTCGACAACAAGGACGGCGCCTACACCCCAGGCCTGTATGCCCGCCTGAA ACTGGTGGGCAGCGGCACCTACTCCGCCGTGTTGATCAACGACGAAGCCGTGGGCACCGACCTGGGCAAGAAATTCGTGCTGGTGATGGATGCCGAGAAC AAGCCGGCCTACCGCGCCGTCGAACTGGGGCCGAAGATCGAAGGCCTGCGCATCGTGCGCAGCGGCCTGAACAAGGACGACACCATTATCGTCAAGGGGC TGCAACGTGCTCGCCCGGGCGCACCGGTCACGCCTGAAACCGTGCCGATGGCCAGCGACGAAACCATTGCCGCCCTGGCACAACAACGTAAAGCGCTCGA AGCCAGCAACCTGCCCCAAGTCGCGCCGTCCAAGGCCGCGTCAGGATCGGCAGGCAAACTGGCCGCTGCGACCCCACGCGGTTAAGGGACTGAATCCAAG
DNA Sequence for Gene
>VP02_RS17655
ATGAAATTTTCCCAGTTCTTCATTTCGCGGCCGATCTTCGCAGCGGTGCTTTCGCTGCTGATCCTGATCGCCGGCGCCATCTCGCTGTTCCAATTGCCGA TCAGCGAATACCCGGAAGTCGTGCCGCCGACCGTGGTCGTGCGCGCCAACTTCCCGGGCGCCAACCCCAAGGTTATCGGCGAGACCGTGGCCGCGCCCCT GGAGCAAGCCATCACTGGCGTCGAGAACATGTTGTACATGTCCTCGCAGTCCACCGCTGACGGCAAGATCACCCTGACCATCACCTTCGCCCTGGGCACC GACCTGGACAATGCCCAGGTGCAGGTGCAGAACCGCGTCACCCGAACCGAGCCCAAGCTGCCGGAAGAAGTGACCCGGATCGGCATCACGGTGGACAAGG CATCGCCCGACCTGACCATGGTCGTGCACTTGACCTCGCCGGACAAACGCTACGACATGCTCTACCTGTCCAACTACGCCCTGCTCAACATCAAGGATGA GCTGGCGCGCCTGGGCGGCGTGGGTGACGTGCAACTGTTCGGCATGGGCGACTACTCCCTGCGGGTCTGGCTGGACCCGAACAAGACCGCTTCGCGCAAC CTGACCGCCACCGATGTGGTCACGGCGATCCGTGAACAGAACCGCCAGGTGGCTGCCGGTGCCCTGGGTGCGCCGCCAGCGCCCAATGCCCAGGCTTTCC AGCTGTCGATCAACACCCAGGGTCGCCTGGTAAATGAGGAAGAATTCGAGAACATCATCATTCGTTCCGGCGCCAACGGTGAGATCACTCGCCTGAAGGA CATCGCCCGGGTCGAACTGGGTTCCAGCCAATACGCCCTGCGTTCGCTGCTGGACAACCAGCCGGCGGTGGCGATCCCGATCTTCCAGCGTCCAGGCTCC AACGCCATCCAGATCTCCAACGACGTCCGCGAGAAGATGGATGAGTTGAAGAAGGGCTTCCCGGCCGGGATGGACTACAGCATCGTCTATGACCCGACGA TCTTCGTCCGGGGCTCCATCGAGGCTGTGGTGCATACCCTGTTCGAAGCACTGATTCTCGTGGTGCTGGTGGTGATCCTGTTCCTGCAGACCTGGCGCGC CTCGATCATTCCATTGGTGGCCGTGCCGGTTTCGCTGATCGGTACGTTCGCGGTGATGCACCTGTTTGGCTTCTCGTTGAACGCCCTCTCGCTGTTCGGC CTGGTACTGGCGATCGGTATCGTGGTGGACGACGCGATCGTGGTGGTGGAGAACGTCGAGCGAAACATCGAACTGGGGCTCACCCCTGTGGAGGCGACAA AGCGCGCCATGGGCGAAGTAACCGGCCCGATCATCGCCACCGCCCTGGTGCTGTGCGCGGTCTTCGTTCCGGCGGCGTTCATCAGTGGCTTGACCGGGCA GTTCTATAAGCAGTTCGCCTTGACCATTGCCATCTCCACGGTGATCTCGGCGATCAACTCCCTGACCCTGTCGCCGGCCCTGGCTGCCGTGTTGCTCAAG GGCCATGATGCGCCCAAGGACCGTTTTTCCAAGTTCCTGGACAAGGTTTTCGGCGGCTGGCTGTTCCGTCCGTTCAACCGCTTTTTCGAACGAGCCAGCC ACGGTTACGTGGGCACCGTCGCTCGGGTGATCCGCAGCAGTGGCATCGCCCTGGTGCTGTACGCGGGCCTGATGGTGCTGACCTTCTTCGGCTTCTCCAA CACCCCGACCGGCTTCGTACCCGGCCAGGACAAGCAATACCTGGTGGCCTTCGCCCAACTGCCGGACGCCGCGAGCCTGGATCGCACCGAAGACGTGATC AAGCGCATGTCCGATCTGGCCCTCAAGCAACCGGGCGTTGAAAGCGCCGTGGCCTTCCCGGGCCTGTCGATCAACGGTTTCACCAACAGCCCGAACGCCG GCATCGTGTTCGTGACCCTCAAGCCCTTCGACGAGCGCAAGGACCCGAGCATGTCGGCCGGCGCCATCGCCGGTGCCTTGAACGGCCAGTACGCAGGGAT CCAGGAGGCCTACATGGCGATCTTCCCACCGCCGCCGGTACAGGGCCTGGGCACGATCGGTGGTTTCCGCCTGCAAATCGAAGACCGGGGCAACCTGGGC TACGACGAGCTGTACAAAGAAACCATGAACATCATTACCAAGAGCCACAACGTGCCGGAACTGGCCGGGTTGTTCACCAGCTACACCGTGAACGTGCCCC AGGTCGATGCCGCCATCGACCGTGAAAAAGCCAAAACCCACGGCGTGGCCGTCAGCGACATCTTCGATACCCTGCAGATCTACCTGGGTTCGCTGTATGC CAACGACTTCAACCGCTTCGGCCGTACCTACCAGGTCAACGTCCAGGCTGAGCAGCAGTTCCGTCTCGAGTCAGACCAGATCGGCCAGCTCAAGGTGCGC AACAACCGTGGCGAGATGATCCCGCTGGCGACCTTCATCAAGGTCAGCGACACCTCGGGGCCAGACCGCGTGATGCATTACAACGGTTTCATCACGGCTG AAATCAACGGTGCCGCCGCCCCGGGCTACAGCTCCGGCCAGGCTGAAAAGGCCATCGAGAAACTGCTCAAGGACGAATTGCCCAACGGCATGACCTATGA GTGGACCGACCTGACCTACCAGCAGATCCTCTCGGGCAACACCGCGCTGTTCGTGTTCCCACTCTGCGTACTGCTGGCGTTCCTGGTGCTCGCGGCGCAG TACGAAAGCTGGAGCCTGCCATTGGCGGTGATCCTGATCGTACCGATGACCCTGTTGTCGGCGATTACCGGGGTGATTCTCTCCGGTGGCGACAACAACA TCTTTACCCAGATCGGCTTGATTGTACTGGTGGGACTTGCCTGCAAGAACGCGATTCTGATCGTCGAGTTCGCCAAGGATAAACAGCTCGAAGGCATGAA CCCGCTGGCGGCGGTCCTCGAAGCGTGCCGCCTGCGTCTGCGGCCGATCCTGATGACCTCCTTCGCCTTCATCATGGGCGTGGTGCCCCTGGTGTTCTCC AGCGGCGCGGGTGCGGAAATGCGCCACGCCATGGGTGTGGCGGTGTTCTCCGGGATGCTCGGCGTGACCTTTTTCGGCCTGCTGCTCACCCCTGTGTTCT ATGTACTGATCCGCAACTTCGTCGAGCACAGCGAGGCCCGCAAAGCGGCCCGGGCTTTGAAACTGGAGGCGCAACAATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GTTTGAAAGCGTTCGTGCCGAGCTTGCTGGTGTTGGCCTTGAGTGCCTGTGCCGTGGGCCCGGACTACAAGGCCCCGCAAACGGAGGCGGCGAATATCAC CACCGCCACCGACGGCGCCGCCGGCCAGAAGAACTTCGACCGCGCCCGCTTTGAAGGGATCTGGTGGCAGCAGTTCGACGACCCGACCCTTAACGCGTTG GTGACCCGTTCCCTGGAAGGCAACCGCGAGTTGCGCGTGGCTTTCGCCCGCTTGCGGGCCGCCCGGGCGATTCGCGATGACGCCAGCAATGACGCAATGC CGACCATCACCAGCCGTGCCAGCAGCAACCTGGGCAAAGGCCAGATCCCGGGGCAGACCACCGACCGGGTCAATACCGAGCGTTACGACCTGGGCCTGGA CATGGCCTGGGAGCTGGACTTGTTCGGGCGCATCCAGCGCAACCTGGAAGCCACCGATGCCGATCAACAAGCGATCGAGGCCGATCTCTATCAGTTGCAG
Amino Acid Sequence
>multidrug efflux RND transporter permease subunit
MKFSQFFISRPIFAAVLSLLILIAGAISLFQLPISEYPEVVPPTVVVRANFPGANPKVIGETVAAPLEQAITGVENMLYMSSQSTADGKITLTITFALGT DLDNAQVQVQNRVTRTEPKLPEEVTRIGITVDKASPDLTMVVHLTSPDKRYDMLYLSNYALLNIKDELARLGGVGDVQLFGMGDYSLRVWLDPNKTASRN LTATDVVTAIREQNRQVAAGALGAPPAPNAQAFQLSINTQGRLVNEEEFENIIIRSGANGEITRLKDIARVELGSSQYALRSLLDNQPAVAIPIFQRPGS NAIQISNDVREKMDELKKGFPAGMDYSIVYDPTIFVRGSIEAVVHTLFEALILVVLVVILFLQTWRASIIPLVAVPVSLIGTFAVMHLFGFSLNALSLFG LVLAIGIVVDDAIVVVENVERNIELGLTPVEATKRAMGEVTGPIIATALVLCAVFVPAAFISGLTGQFYKQFALTIAISTVISAINSLTLSPALAAVLLK GHDAPKDRFSKFLDKVFGGWLFRPFNRFFERASHGYVGTVARVIRSSGIALVLYAGLMVLTFFGFSNTPTGFVPGQDKQYLVAFAQLPDAASLDRTEDVI KRMSDLALKQPGVESAVAFPGLSINGFTNSPNAGIVFVTLKPFDERKDPSMSAGAIAGALNGQYAGIQEAYMAIFPPPPVQGLGTIGGFRLQIEDRGNLG YDELYKETMNIITKSHNVPELAGLFTSYTVNVPQVDAAIDREKAKTHGVAVSDIFDTLQIYLGSLYANDFNRFGRTYQVNVQAEQQFRLESDQIGQLKVR NNRGEMIPLATFIKVSDTSGPDRVMHYNGFITAEINGAAAPGYSSGQAEKAIEKLLKDELPNGMTYEWTDLTYQQILSGNTALFVFPLCVLLAFLVLAAQ YESWSLPLAVILIVPMTLLSAITGVILSGGDNNIFTQIGLIVLVGLACKNAILIVEFAKDKQLEGMNPLAAVLEACRLRLRPILMTSFAFIMGVVPLVFS SGAGAEMRHAMGVAVFSGMLGVTFFGLLLTPVFYVLIRNFVEHSEARKAARALKLEAQQ
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site