Strain | Pseudomonas fulva NBRC 16637 = DSM 17717 strain NBRC 16637, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CGACACCGATATCTTCCTGGCCCTGACCAACGATGACGAAGCCAACATCATGTCGTCCCTGCTGGCCAAGCGCCTGGGTGCGCGCAAGGTCATGACGATC ATCAACAACCCGGCCTATGTGGACCTGGTGCAGGGCGGTGAAATCGACATCGCCATCAGCCCGCAATTGGCCACCATCGGTACCTTGCTGGCGCATGTGC GCCGTGGCGATATCGTGAGCGTGCACTCGCTGCGTCGTGGTGCAGCCGAAGCCATCGAGGCTGTGGCCCACGGTGATGCGAAGTCGAGCAAGGTGGTGGG CAAGGCGATCGAGGACATTACCCTGCCCCCGGGGACGACCATAGGTGCCATCATTCGCCACGACAGTGTGCTGATCGCGCACGACACGACAGTCATCGAA TCAGGTGACCATGTGATCCTGTTCGTTGTGGACAAGAAACACATTCGGGATGTGGAGAAGCTGTTCCACGTCGGCTTGAGTTTCTTCTAGGAGGCGGGAC
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DNA Sequence for Gene |
>PFU01S_RS00040
ATGCGCCAATCGTTGGAAAAGATGCTGGCCAAGGGTGTGGATAACCCGTTGTTGCGCTTTGGCCTGGGCAAGGCGTGGCTCGACGAAGGCGATGGTGCCC AGGCTGCCGTGCACCTGGCTCGCTGTGTCGAGCAGGACCCCACCTATTCGGCAGCCTGGAAGCTGTTGGGCAAGGCCTACCAGTTACTAGGGGACCTGCC AGCGGCGCGCAAGGCCTGGGAAGATGGCATCGCGGCGGCGCAGGCCCATGGCGACAAGCAGGCCGAGAAAGAAATGACGGTGTTTCTCAAGAAACTCGAC AAACGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GTGCGCTGTCGCCGACACGTCGGCTGCCAGACAGCCGCTGCCGGCGATGCGCGCCTCAATACCAGCGCGCCTCACCCGCCGGACGCTTCTTGAAGCGCTT CATGCTCCACATGTACTGGCTGGGATACTCGCGCACATAGCGCTCGACCACCTTGCTCATCGCGGCCGCCGACTCGTTCACGTCGGTGCTGTACATCGCC TCCGGCGCGGCTTCCAGAAACACCTTGAAGCCTGACCCGTCAGGCAGGCGCAGGGCATGCAGGAAAACCCCGACTGCCTTGCCGCCGGCGAGCATGTTCG GCACGAACTTGCTGGTCAGCGCTTCAGTGCCCAGGAAGGGAACGAATACACCCGCCGATTCGGCCGGCTCGGGATCGGCCGGGATGCCGACCTGGCCGCC GCGCCGAACTTCCTTGATCACGCTGAGGATGCCTTCCTTGGTCGAAGGCGCCACACGGTTACCCATCTGCACACGCTGCTCGCGCAGCAGGTCGTCCACC
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Amino Acid Sequence |
>hypothetical protein
MRQSLEKMLAKGVDNPLLRFGLGKAWLDEGDGAQAAVHLARCVEQDPTYSAAWKLLGKAYQLLGDLPAARKAWEDGIAAAQAHGDKQAEKEMTVFLKKLD KR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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