Pseudomonas fulva NBRC 16636 = DSM 17004, PFU01S_RS05180
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fulva NBRC 16637 = DSM 17717 strain NBRC 16637, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TCGAAGATCGTCATCAAGGTCCCGTTGACCCTGGCGATCATGCCCACCCTGATGGTGATGCTGGGCAACCAGGCGTTCGCCTTCCCTCTGGTCAACGTCA ACGAGATCTTCCACCTGGACCTGTCGCGCACCAACGTGGTCGATGGCCAGGAAGTGGTGATCGTGCGGGACAAGGCGTTACCGCTGTTCTACCTCAAGCG CTGGCTGGTCCAGGGCCAGGTGCATGAAGAACAACACGAAGGTCACGTGGTGATCCTGTCGGTCGGCACCCAGCGCATCGGCTTTGTCGTCGATCAACTG GTGGGCCAGGAAGAAGTGGTAATCAAGCCTCTGGGCAAGATGTTGCAAGGCACCCCGGGGATGTCCGGGGCCACCATCACCGGCGACGGTCGCATTGCGC TGATTCTCGACGTCCCGAGCATGCTCAAGCGTTACGCCGCGCGGCGTATTTGATCTCGGTGGCGCCCCCTTGGCCGGGGGCGCCGCCTAACGGAGTGTTT
|
|
| DNA Sequence for Gene |
>PFU01S_RS05180
ATGGCAGTCAAGGTCCTGGTGGTGGATGATTCCGGTTTCTTCCGCCGCCGCGTCTCGGAAATCCTCTCGGGGGACTCGACGATCCAGGTAGTGGGCACTG CAACCAACGGCAAGGAAGCGATCGACCAGGCGCTTGCGCTCAAGCCCGATGTGATCACCATGGACTACGAGATGCCCATGATGGATGGCATCACGGCGGT GCGGCACATCATGCAAAGGTGCCCGACACCTGTGCTGATGTTCTCATCGCTCACCCATGAAGGCGCTCGGGTCACGCTCGATGCGCTCGATGCCGGGGCG GTGGACTACCTGCCGAAGAATTTCGAAGACATCTCGCGCAACCCCGAGAAGGTCAAGCAGATGCTGTGCGAGAAGGTGCATACCCTGTCGCGAAGCAATC GCCGCATGGCCAGTTACGCCCGCCCGGCGGTCGCGCCCGCTGCCGCCCCCGCGCCGACGCCCACAACAGCCACCAGCGCTGCAGCGTCGGCACCGGTGCG CAGCACCGCTGCCCCCGTCAGGCCGGCGGCTGCCCATTCGCCTGCGCCCAAGCGCAAGCCTTACAAGCTCGTTGCCATCGGCACCTCGACCGGGGGACCG GTGGCCTTGCAGCGCGTGCTCACGCAATTGCCAGGCAATTTCCCGGCGCCGATCGTGCTCATCCAGCACATGCCGGCAGCCTTCACCAAGGCCTTTGCAG AGCGCCTGGACAAGCTGTGCCGGATCAGCGTCAAGGAAGCCGAAGATGGCGACATTCTGCGCCCCGGGCTGGCGCTGTTGGCCCCCGGTGGCAAACAGAT GATGATCGATGGCCGTGGAACCGTGAAGATTCTGCCCGGTGACGAGCGGCTCAACTACAAGCCCTGCGTGGACATTACCTTTGGCTCGGCAGCCAAGTCC TATGGCGACAAGGTGTTGTCCGTGGTACTGACGGGCATGGGCGCGGACGGTCGGGAAGGGGCGCGCCTGCTCAAGCAGGGTGGCAGCACGGTGTGGGCAC AGGATGAAGCCAGCTGCGTGATTTATGGCATGCCCATGGCGATCGTCAAGGCCAACCTGGCCGATGCGGTGTACAGCCTCGACGATATTGGCCGGCACCT GGTGGAGGCGTGCGTCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
TGGACGTGCTCAGCCTGATCGGCCTGATCCTGGCTTTTGTCGCCATCGTGGGCGGTAACTTCCTCGAAGGCGGCCATGTGGGCGCCCTGATCAATGGGCC GGCAGCGCTGATCGTATTGGGCGGTACCCTGGCGGCAGCCTTGCTGCAATCGCCGCTCTCCTCGTTCAAGCGGGCCTTGCAGATCCTGCGCTGGATCCTG TTTCCACCGCGCGTCGATCTGCCGGGTGGGGTCGATCGCGTGGTGAACTGGAGCCTCACGGCGCGCAAGGAAGGCCTGCTCGGGCTGGAAGGGGTAGCCG ATGGCGAGCCTGACCCTTACGCGCGCAAGGGCTTGCAGTTGCTGGTCGACGGCGCCGAGCCCGAAGCCATTCGCAGCATCCTCGAAGTGGATTTCCTGAC CCAGGAGGGCCGTGACCTGCAGGCTGCCAAAGTCTTCGAGAGCATGGGCGGGTACGCTCCGACCATCGGAATCATCGGCGCGGTGATGGGGCTGATTCAC
|
|
| Amino Acid Sequence |
>chemotaxis protein CheY
MAVKVLVVDDSGFFRRRVSEILSGDSTIQVVGTATNGKEAIDQALALKPDVITMDYEMPMMDGITAVRHIMQRCPTPVLMFSSLTHEGARVTLDALDAGA VDYLPKNFEDISRNPEKVKQMLCEKVHTLSRSNRRMASYARPAVAPAAAPAPTPTTATSAAASAPVRSTAAPVRPAAAHSPAPKRKPYKLVAIGTSTGGP VALQRVLTQLPGNFPAPIVLIQHMPAAFTKAFAERLDKLCRISVKEAEDGDILRPGLALLAPGGKQMMIDGRGTVKILPGDERLNYKPCVDITFGSAAKS YGDKVLSVVLTGMGADGREGARLLKQGGSTVWAQDEASCVIYGMPMAIVKANLADAVYSLDDIGRHLVEACV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|