Pseudomonas fulva NBRC 16636 = DSM 17004, PFU01S_RS05800

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
SMART	SM00091	pas_2	IPR000014	PAS domain	302	367	3.2E-4
Gene3D	G3DSA:3.20.20.450	EAL domain	IPR035919	EAL domain superfamily	593	845	8.1E-87
Pfam	PF13188	PAS domain	IPR000014	PAS domain	302	359	1.9E-4
SUPERFAMILY	SSF55073	Nucleotide cyclase	IPR029787	Nucleotide cyclase	430	581	1.65E-42
CDD	cd01948	EAL	IPR001633	EAL domain	596	829	1.35206E-99
SMART	SM00052	duf2_2	IPR001633	EAL domain	590	832	3.0E-94
SUPERFAMILY	SSF141868	EAL domain-like	IPR035919	EAL domain superfamily	595	839	1.31E-81
CDD	cd01949	GGDEF	IPR000160	GGDEF domain	426	578	2.75623E-53
NCBIfam	TIGR00254	JCVI: diguanylate cyclase (GGDEF) domain	IPR000160	GGDEF domain	421	579	1.6E-37
Pfam	PF00563	EAL domain	IPR001633	EAL domain	596	827	1.1E-63
CDD	cd00130	PAS	IPR000014	PAS domain	311	411	2.13596E-5
NCBIfam	TIGR00229	JCVI: PAS domain S-box protein	IPR000014	PAS domain	298	419	2.3E-9
PANTHER	PTHR44757	DIGUANYLATE CYCLASE DGCP	-	-	213	838	0.0
Gene3D	G3DSA:3.30.450.20	PAS domain	-	-	292	412	1.6E-14
SMART	SM00267	duf1_3	IPR000160	GGDEF domain	414	580	1.4E-54
Pfam	PF05228	CHASE4 domain	IPR007892	CHASE4	73	212	1.3E-12
Pfam	PF00990	Diguanylate cyclase, GGDEF domain	IPR000160	GGDEF domain	426	575	2.0E-41
SUPERFAMILY	SSF55785	PYP-like sensor domain (PAS domain)	IPR035965	PAS domain superfamily	293	412	1.47E-15
Gene3D	G3DSA:3.30.70.270	-	IPR043128	Reverse transcriptase/Diguanylate cyclase domain	419	592	6.3E-51

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.