Strain | Pseudomonas fulva NBRC 16637 = DSM 17717 strain NBRC 16637, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
TGCAACGCTGCTGGGGGATGGGCGCGTCGTGTTGATTCTCGACCTGTTGGGGCAATTGCGTGGCCAGCAACGGCGGCTTGCTCGTTTGCCTGGAGGCACG CCGCGTGGGTTGCTGCCGGCAGCGACCCCGGACCGCACCTTGCTGGTGATGGTGGTAGACGATTCGGTCACGGTGCGCAAGGTCACCAGCCGCCTGCTTG AGCGCCATGGCATGAGCGTGATCACCGCCAAGGACGGGGTGGATGCCATGGCGGTGCTGGAAGGGCACCGGCCCGATGTGTTGCTGCTGGATATCGAAAT GCCGCGCATGGACGGTTTCGAAGTGGCGACCCGCATTCGCCAGGACGCCCGCCTCAAGGCGCTGCCCATCATCATGATCACCTCGCGTACGGGGCACAAG CACCGCGACCGAGCCATGGCCATCGGGGTCAACGAATACCTCGGCAAGCCTTATCAGGAGTCGGTCTTGCTGCACAGCATCCTCCGGTGGAGCCAGTCCC
|
|
DNA Sequence for Gene |
>PFU01S_RS12095
ATGCTTGAACTGATAGCCGGGCAGCGCAGCAGCCTTACCGGGCTGTTGCTGCCATTGGGCGACCGTACGTTGGTGCTGCCCAATGTGGCCGTAGCCGAAC TCAGTGGGCTGCGCAATGTAGCGTGTCAGCGCGGTGACCTGCCCTGGCACCTGGGCTGGGTCGACTGGCGCCAGCAGCGCTTGCCCCTGATCGGTTTCGA AGCGGCCTGTGACAGCCATACGCCCTGTGGAGAACGGGCCCGTGTGGTGGTGCTCAACGCACTGGGCGACACGGGGTTGCGTTACCTGGCCTTGTTGCTG CAAGACATACCGCGCTCGTGCAAGCTCGACAGCCAGCTCAACTACGTTGACGTGACGTTGGCACCCCTTGAGTTGGCCGCTGTCCAGGTAGGGGATCAGG TGGCGCGCGTGCCTGACCTGGTCGGGCTCGAGCGCCTGGTCAGGGACGCACAGCGCAGCGGCAGGCTGCAAACGCCGGGTTAG
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
AGCGTGCCGCCGGTACGCGTCGAGTGTCGTGGCTGAAACTAGCTGGGTTTCGAAAGGTCTTTAAGTGCATGTATTACGGTGAACGCTTCAATGCCTGGAC CCACTTGGTGGGTGCGTTGCTGGCAGGCCTCGGTGCCCTCTGGCTGATCATCGGCGCCATCTTGCAGGGGGACCCCTGGAAGATCGTCAGTTTCTCCATC TACGGTGGCACGCTGCTGTTGCTGTACAGCATTTCCACGCTGTATCACAGCACGCGAGGGCGGGCGAAGGTGATCATGCGCAAGCTCGATCACCTCTCCA TCTACCTGCTGATAGCCGGGAGCTACACGCCCTTCTGCCTGATCAGCCTGCGCGGGCCCTGGGGCTGGAGCCTGTTCGGCATCGTCTGGGGGCTGGCCGT ACTGGGCATGTTGCAGGAAATCAAGCCCCGCTCCGAAGCACGCGTCTTGTCCATCGTGATCTACGCCGTGATGGGCTGGATCGTGCTGGTCGCGGTCAAC
|
|
Amino Acid Sequence |
>chemotaxis protein
MLELIAGQRSSLTGLLLPLGDRTLVLPNVAVAELSGLRNVACQRGDLPWHLGWVDWRQQRLPLIGFEAACDSHTPCGERARVVVLNALGDTGLRYLALLL QDIPRSCKLDSQLNYVDVTLAPLELAAVQVGDQVARVPDLVGLERLVRDAQRSGRLQTPG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|