Pseudomonas fulva NBRC 16636 = DSM 17004, PFU01S_RS13085
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fulva NBRC 16637 = DSM 17717 strain NBRC 16637, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CCTGACCGAAAAGGGCTGGGCCCAAATGCGCGCTGCCGTGGCCGACGCAGGGCCTTGGCAGGCATTGGTCAGTTCGCCGTTGCAGCGCTGTGGCCGATTC GCCGATGAATTGGGCGCCAGGCTGGGCCTGCCCGTGCAGCGCGAGCCTGCATTGCAAGAGCTGCATTTCGGCGATTGGGAAGGGCGTACGGCGTTGCAGA TCATGGAACACGACGCACAGGCGCTTGGGCAGTTCTGGGCTGACCCCTATGGCTATACGCCGCCCAATGGCGAGCCGGTCCAGGCGTTTGCGCAGCGCGT CCTGACAGCCATCGAGGGGTTGTACCGCCAGCATGCCGGCAAGCGCGTACTGCTGGTCACCCATGGGGGTGTCATGCGCCTGCTGCTGGCCCGCGCCCGG GGCCTGCCCAGGGCGCAGCTGTTGCAGGTGGAAGTCGGCCATGGCGCACGGGTGCGCTTGCAAGTCGGCGAGGATGGCCAGCTGGTTGAGGAGGGTTAGC
|
|
| DNA Sequence for Gene |
>PFU01S_RS13085
ATGCAGCCATTCTGGATTGCCCTGCAGTTTCTAAGCAGCCTGCCTGTCACCTTGCCTGGCATGCCAACGCCACGCCAAGTGGGCCGCTCGTTGTTGTACT ACCCCTTGGTCGGGCTGCTGTTCGGTCTGGTGCTGTGGCTGGCCAGCCACTGGCTCGAAGGCGTTCCGGCGGCGCTGCATGCTGCCTTGCTATTGACCCT CTGGGTGCTGCTCAGTGGCGCGCTGCACTTGGACGGCCTGGCAGACAGCGCAGATGCCTGGCTAGGCGGGTTTGGTGATCGTGAACGCACGCTGCAGATC ATGAAGGACCCGCGCAGCGGGCCGGCAGCGGTGGTGACGCTGGTTTTGGTGCTGCTGCTCAAGTTCTGCGCCTTGTGGGCACTGATCGAGCAGGGGGCTG GCCTGCAACTGATGCTTGCACCGGTCATTGGTCGAGCAGCGATGCTGGGGTTGTTCCTGTGTACTCCCTATGTGCGCCCTGGCGGGTTAGGCCAGGCACT GGCCGATCACATGCCCCGCCGCGCAGCGGGATGGGTACTGTTGACCTGTGCTGGCCTGGGCCTGGCTTTGACCGGCTGGGCAATGGTGCTGACGGCGGTC GTGTTCGTGGCATTGCGCAGGGTGATGTGCAATCGTCTGGGCGGCACCACGGGCGACACCGCAGGTGCACTGCTGGAACTGCTTGAGCTCACCGTCCTGC TGGGCCTTGTCGTGATCCGCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GCAAATCGCGGCAGCGCGGTCTTCCGGCCAGCCTCAGCAAGGGGACGGCCAGCGCGTGGCGCAGTACCTGCAGGCCCCGCTGAACAGGGCCGAAGCCACG AACGTGCCCCGTTCGCGCCTGGTGGTGGGCGAGTCCGGCTGCACGCGCCGCCTGTCAGGCTGCCGGCAGTACCTGGAGGACGTACTGGGCGTGCTCGATC AGCACCGCGTGCACTGGGCGTTCTACAGTTTCCGCGAAGACAGCTGGGACGGGATGGATTACGAATTGGGTACCGCCAAAGTGCCCTGGCGTTACTGGCA GGCGATCGACCAGGGGTTGCCCGACCCGCTGCCACGGCAGGCGACGCCGGCGTTCGAACCGATACGCAAACGACTGGCCATAGACCAATGGCGACGTCTG CTGATGTCCTGCTTGCTGTCAGTCGGCTCCAGCGTTCATGCTGTAACCAAATGCTTCCTTGATAACTCGACGTACAGGGCGGTCACCGTCCCTGGAATAT
|
|
| Amino Acid Sequence |
>cobalamin synthase
MQPFWIALQFLSSLPVTLPGMPTPRQVGRSLLYYPLVGLLFGLVLWLASHWLEGVPAALHAALLLTLWVLLSGALHLDGLADSADAWLGGFGDRERTLQI MKDPRSGPAAVVTLVLVLLLKFCALWALIEQGAGLQLMLAPVIGRAAMLGLFLCTPYVRPGGLGQALADHMPRRAAGWVLLTCAGLGLALTGWAMVLTAV VFVALRRVMCNRLGGTTGDTAGALLELLELTVLLGLVVIR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|