Pseudomonas frederiksbergensis SI8, JZ00_RS28810

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas frederiksbergensis strain SI8 contig00035, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CAGCAAGCGGGCGGCATCGAGTGCTACCCGGTCACCGGCGAGATCACCTATGGCCTCGAACGCCTGGCCATGTACCTGCAAGGCGTGGATTCGGTGTACG ACCTGGTATGGGCCGACGGCCCGTTCGGCAAGGTGACCTACGGCGACGTGTTCCACCAGAACGAAGTGGAGCAGTCCACCTACAACTTTGAACACGCCAA CGTCGACAAGCTGTTCGAACTGTTCGATTTCTATGAAAGCGAAGCCAAGCGCCTGATCGAGCTGGACCAGCCGCTGCCGTTGCCGAGCTATGAAATGGTG TTGAAGGCGTCCCATACCTTCAACTTGCTGGACGCACGCCGGGCGATTTCCGTGACCGCGCGCCAGCAATACATCCTGCGTGTACGCACCCTGGCGCGTT CCGTTGCGCAAGCCTACCTGCTGGCCCGTGCCAAGCTGGGCTTCCCGATGGCGACCCCGGATCTGCGTGATGAAGTGTTGGCTAAGCTGGAGGCTGCACA
DNA Sequence for Gene
>JZ00_RS28810
ATGAGTGCTCAAGATTTTCTGGTTGAACTGGGCACCGAAGAACTGCCACCCAAAGCCCTGAACACCCTGGCCGATGCGTTCCTGGCCGGCATCGAAAAAG GCCTGCAAGCCGCTGGCCTGAACTTCGAAACCAAGCACGTCTATGCCGCGCCGCGTCGCCTGGCCGTGCTGATCACCGCCCTGGAAACCCAGCAGCCTGA CCGCAGCATCAACCTCGACGGCCCGCCGCGCCAAGCCGCGTTCGATGCCGAGGGCAACCCGACCCAGGCCGCGCTGGGCTTCGCCAAGAAGTGCGGCGTA GACCTGAGCGAGATCGACCAGAGCGGTCCGAAGCTGCGCTACAGCCAGAGCATCAAGGGCAAGCCGACCGCCAGCCTGTTGCCGACCATCGTCGAAGACT CCCTCAATGACTTGCCGATCCCCAAGCGCATGCGCTGGGCTGCGCGCAAGGAAGAGTTTGTACGTCCAACCCAATGGCTGGTGATGCTGCTCGGTGACCA GGTTATCGACTGCACGATCCTGGCCCAGAAGGCCGGTCGCGATTCCCGCGGTCATCGCTTCCATCACCCGCAGAGCGTGCGCATCACTTCGCCGGCCAAT TACCTGGCCGACCTGCGCACCGCCTATGTCCTGGCCGACGCCAACGAGCGCCGCGAGCTGATCAGCAAGCGCACCGAAGAACTGGCCACCCTGCAGGAAG GCACCGCCATCGTGCCGGCCAACTTGCTGGACGAAGTCACCGCGCTGGTGGAATGGCCGGTGCCGCTGGTGTGCTCCTTCGAGGAACGTTTCCTTGAAGT GCCGCAGGAAGCACTGATCACCACCATGCAGGACAACCAGAAGTACTTCTGCCTGCTGGACGCCGAAGGCAAGTTGCTGCCGCGCTTCATCACAGTCGCC AACATCGAAAGCAAGGACCCGCAGCAGATCATCGCCGGTAACGAGAAAGTCGTTCGCCCGCGCCTGACCGATGCCGAGTTCTTCTTCAAGCAAGACAAGA AACAACCCCTGGAAAGCTTCAACGAGCGCCTGCGCAACGTGGTGTTCCAGGAGAAACTCGGCAGCGTCTACGACAAGGCCGAGCGTGTTTCGAAACTGGC GGCATTCATCGCCCCACGTATCGGCGGCGACGCCCAGCGTGCGGCGCGTGCCGGCATCCTGTCCAAGTGCGACCTGTCCACCGAAATGGTCGGTGAGTTC CCGGAGATGCAAGGCGTCGCCGGCTACTACTACGCCCTCAACGATGGCGAGCCGCAGGATGTGGCCCTGGCGCTGAACGAGCAGTACATGCCCCGCGGCG CCGGCGCTGAATTGCCGACCACCCTGACCGGTGCGGCCGTGGCGATCGCCGACAAGCTCGACACCCTGGTCGGCATCTTCGGCATCGGCATGCTGCCAAC CGGCAGCAAAGACCCGTATGCCTTGCGTCGCGCGGCGCTAGGCGTGTTGCGGATCCTGATCGACAAGCAATTGGACCTGGACCTGAATGACGCCGTGGCT TTCGCCGTCAATGCGTTCGGCAGCAAGGTCAAGGCTGCCGGCCTGGCCGATGCGGTGCTGGAATTTATCTTCGACCGCCTGCGTGCGCGTTACGAAGACG AAGGCGTCGACGTCGCGACCTACCTGTCGGTACGTGCCCTGAAGCCGGGTTCCGCCCTGGACTTCGACCAACGCGTACAAGCGGTGCAGTCCTTCCGCAA ACTGCCGGAAGCGGCAGCGCTTGCGGCAGTGAACAAGCGCGTATCGAACCTGTTGGGCAAGGCCGAAGGCAATATCGCGGCCACCGTCGAAGCCAAGTAC TTCGACAACGCCAACGAGTTCTCCCTGTATTCGGCGATCCAGCAGGCGGACCAGGCGGTCCAGCCGATGGCGGCGGCACGTCAGTACAGCGAAACCCTCG CGCGCCTGGCTGCACTGCGCGAACCGGTCGATGCGTTCTTCGAAGCGGTGATGGTCAATGCCGAGGACGCCAACGTGCGGGCCAACCGCTATGCGCTGCT GGCGCGCCTGCGTGGGTTGTTCCTCGGCGTTGCTGACATTTCGCTGCTGGGGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CGCTTGAAACTGCTGATTCTCGATCGGGACGGAGTGATCAACCACGACTCCGACGCTTACATCAAAACGGTGGAGGAATGGTTGCCGATTCCTGGTTCCA TCGAGGCCATCGCGCAGTTGAGCAAAGCAGGCTGGACGGTGGCGGTGGCCACCAACCAGTCGGGCATCGCACGCGGTTACTACGAACTTGCCGTCCTAGA GGCCATGCATGATCGCTTGCGCGAACTGGTGGCCGAGCAGGGCGGCGAGGTCGGGTTGATCGTTTATTGCCCGCACGGGCCGGACGAAGGCTGCGATTGC CGCAAGCCTAAGCCTGGCATGTTGAAAGCCATTGCCGCGCATTATGACGTTGCGCTGGCGGGCGTGTGGTTCGTCGGCGACAGCCTCGGTGACCTGGAGG CGGCCAAGGCCGTCGATTGTCAGCCAGTTTTGGTAAAGACCGGAAAAGGCGAGAAGACTCTGGGCAAGACCCTACCGGTGGGCACCTTGATTTTTGACGA
Amino Acid Sequence
>glycine-tRNA synthetase subunit beta
MSAQDFLVELGTEELPPKALNTLADAFLAGIEKGLQAAGLNFETKHVYAAPRRLAVLITALETQQPDRSINLDGPPRQAAFDAEGNPTQAALGFAKKCGV DLSEIDQSGPKLRYSQSIKGKPTASLLPTIVEDSLNDLPIPKRMRWAARKEEFVRPTQWLVMLLGDQVIDCTILAQKAGRDSRGHRFHHPQSVRITSPAN YLADLRTAYVLADANERRELISKRTEELATLQEGTAIVPANLLDEVTALVEWPVPLVCSFEERFLEVPQEALITTMQDNQKYFCLLDAEGKLLPRFITVA NIESKDPQQIIAGNEKVVRPRLTDAEFFFKQDKKQPLESFNERLRNVVFQEKLGSVYDKAERVSKLAAFIAPRIGGDAQRAARAGILSKCDLSTEMVGEF PEMQGVAGYYYALNDGEPQDVALALNEQYMPRGAGAELPTTLTGAAVAIADKLDTLVGIFGIGMLPTGSKDPYALRRAALGVLRILIDKQLDLDLNDAVA FAVNAFGSKVKAAGLADAVLEFIFDRLRARYEDEGVDVATYLSVRALKPGSALDFDQRVQAVQSFRKLPEAAALAAVNKRVSNLLGKAEGNIAATVEAKY FDNANEFSLYSAIQQADQAVQPMAAARQYSETLARLAALREPVDAFFEAVMVNAEDANVRANRYALLARLRGLFLGVADISLLG
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site