Pseudomonas frederiksbergensis SI8, JZ00_RS26670

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas frederiksbergensis strain SI8 contig00024, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TCTTTCGAAGCCCTGTATGCACGTCATCGGCAGGGGCTTTATCGTTTTCTCGTGTCCTTGAGCAACAAGGCCGAACTGGCCGAGGAAATCTTCCAGGACA CCTGGCTCAGCCTGATTCGCAGCACCACCCAGCCACAAGGCCGGGCGAGTTTTCGTACCTGGTTGTTCCAGATTGCCCGCAATCGCTTGATCGACCATTG GCGCAAACACAGTGTCCATAACCCATTGCACGACAGCTACGACGAGCAACTCCACGTCCAGCCCGACGACACCAGCAGCCCCGAGCAACAGCTGAGCCTG AGTCGCGACCAGGCGCGTCTCGATGCTGCGTTGCAGGCCTTGCCTGAGGACCAGCGCGAAGTCTTCTTGCTGCGCCTGCATGGCGACCTGGAGCTGCCGC AGATTGCTGCCCTGACCGGCGCCCCGCTGGAAACGGTGAAAAGCCGCTTGCGTTACGCCCAGCAGAAACTGCATCGACTGCTGGCCGAGGAGGTACCCGC
DNA Sequence for Gene
>JZ00_RS26670
ATGATCGACCGCAAACACACATCGGATGCCGACGACCAGATGTTGATCGAGCATTTCCGCCAGCACGCCAGCGGCGAACCGCCGCCCTCCCTGGACGCCT TTATCCTCGCCGCCGCCCAGCGTGAAGCCCCGCCGCCCACGCCAAGCCTGTGGCAGCGCTGGCTGCAAGCCTGCCAACGGCCGCGCTGGCAAATGGCGTT CGCCACGGTCGCCGGGGTGGCGCTGATGATCGGCCTGGTGCTGCGTTCGCCCGTGCCCCACGACGAGCTGGCCTCACCCGCTTCGATGGAGTTTTCCGCC GACCAGCAAGAATCCGCCGCCGCCGCAGCACCGCCGGCCATGCCCGCCCCCGCGCCGATCATCCGCATGGCACCCCAAGGCGAACTGGCCCGGGCGCCGG CAAGCCCGATGCAGTCCTTGGCGGAAAAGCCAGCGGCGAAGATGAGCAAATCCGCGCCGGCTGCACTGCCATCGCTGGAGCAAGGCTTGCTGGAGATATT GCGCTTGCGTGAGGCGGGTGAGAGCAAGGCGGCTGATGAGAAGCTGCTGGCGCTGCATAAGCGCTTTCCCGAGGAGGACTTGCCGGCGCGGTTGGAGGCG TTGCGCAAGCGTTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCGAAACCAACGCATACAAAAAACGCCCGGTCATAAAGACCGGGTATTCGAACATCACTGATCCCAAAAGTTGAAGGGGCACTTGCCAGGCGGACGACAC TCGGGAGTCACGTTACAAATGCAGGCATAGCAGGATCACATGAGCGGAACTATACTCGCCAGCATGAAAAAGCTGATGCTCGAACTCGACGGAACCGACC CAAGCAAGCTCTCTATGGCTCGCTTGACGGATTATCTGTGCGAGCTCGCAGAGCTTTTCGGCTCGCAAGATAATGTTCATTTCGACTCTGTCACCGAAGG TTGTGTTTGCCTGAATACTTGGGTGGAAGACGACAAGTACCCCCACGTGCTGAACAGGGTGCGTGAGGCCGCTCAGGGAGTTGGGCCCAAGCGTGCAAGA AAGGCGTACCTGCAACTCTCTGCATTGATGGAGCAAGATCGAGTGGATGGTGTCTTGCAAGCCGCAGATGCGAACATCCTTCAATTCCCCAAAGCAAAGA
Amino Acid Sequence
>hypothetical protein
MIDRKHTSDADDQMLIEHFRQHASGEPPPSLDAFILAAAQREAPPPTPSLWQRWLQACQRPRWQMAFATVAGVALMIGLVLRSPVPHDELASPASMEFSA DQQESAAAAAPPAMPAPAPIIRMAPQGELARAPASPMQSLAEKPAAKMSKSAPAALPSLEQGLLEILRLREAGESKAADEKLLALHKRFPEEDLPARLEA LRKR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site