Pseudomonas frederiksbergensis SI8, JZ00_RS25725

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas frederiksbergensis strain SI8 contig00021, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
ACCTTGACCCCCACGGTCATTGGTAAAAACCGCATTGCGCTGAAAGTGGCGCCTGAGGTCAGCGAGCTGGATTTCACCAACGCGGTCAACATTGCCGGGA CCCTGGTGCCGGCGCTGACCGTACGCCGCACCGATACCAGCATTGCCCTGGCTGACGGCGAGAGCTTCGTCATCAGCGGTCTGATCAGCACCCGCAACAG CTCGCAGGTAAACAAACTCCCTGGGTTGGGCGATGTGCCGATACTCGGCGCGTTCTTTCGTGACAACACCATCAATCGCGAAGAGCGGGAGCTGCTGATG ATCGTCACCCCGCACCTGGTCCAACCGTTGGCCGCCGATGCGCAACTGCCGACGCTGCCCGGTGAACAGCTGCGCAACTACGACCCGAACTTCTATCGCA TGTATTTCCTGGAAAACGGCGAGTTCGACAACCGCAGCGGGTTGTCCCAATGAGCGCTTACTTGAAGTGCGCAAATCAACCGGCTCCCAGGGGGCATGCC
DNA Sequence for Gene
>JZ00_RS25725
ATGAAAGCAATGATCGCGGTAGCGGCGTCCTTGATGCTCGCCGGTTGTGCCAGCAACGGCACCGTGGCCTCGAGCCCGGCCCAGTGCGCCAAGCCCGGCT CAGACCAGGAACTGGCCCTCAACCTGGCCGATGACATGGCCAACGAGGGGCGTCTGTATGCCAGCCTCGCAAATCTTGAAGGGCTGCCTGAAGATCTGGT CCAGGTCCGCCTGCGCAAGGCTCGCGTCCTGCGGCTGATGGGACGCAGCGACGCGGAGCCGTTGTACAAAAGCCTGCTCGGGACTTGCCTGGCCGCCGAT GCGGAACATGGCCTGGGCCAGTTGGCTGCCGCCAGGCATGACAACGCCAGCGCCACGGAACACCTCGAACGCGCGGCGAAAATGGCCCCTACCGAAGGAA AGATTCGCAATGACCTGGGGGTCGTCTACCTCAACCAACGCCGGATCCCACAAGCCCGCTTCGAGTTCATGACCGCCATGGAGCTTCGCCAGTCGGACAC GCTGGCGGCGTTCAACATGGTGACCCTGCTGATCTACCAGGACAATTGGAAGCAGGCGGCCGAGCTCGCGAACATGGCCAGGCTGAGCCCCCAGCAGATC GCTGATGCCCAAGCCCGCGCGGAAAGAATCAGGGGCTCGGCCGATAACGCAGTGACCTCACCATCAAACCGCTCGACCGAGGTCGTCGATGCCTCAACCG GCGCGGTCAAGTAG
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CGCGTTACGAGGAGTCCAGGAAATGAAAACCAGACAATTGATGATCGTATGCATGGCTTGCTTGTCCACCAGCGCCTGGGCCATCGAGCCTGGCCCATCT TCGGCGGCACAGCAAGGCACCGAAAGCTGGATGCAGCTGCAGATTCGTGGCGTCGTTGCTTCCACCCACCTGCAAACCGTATCGGCTGCCGAGCGCGACT TGGCCATGCAGCGTTGGCTCAACAGCTTCACCTACCCGATCCCGATGTTCTTTGACCAGGACATGGGGGGAGATGTCAGCAAGAGTGAATGAAGCGTTCA AGACTATAAGATCGCAGCCTCCGGCAACCCTACGCTCGATGTAGGAATTGCCGGAGGCTGCGATCTTTTGGTTTGTGGGTGTTGACTGAACAGGCCGGGG ACGCTGCGCGTCCAGCGGGAGCAAGCTCCCTCGCCACGGGTGCAGTGTCAGGCTGACCTGGCCCGCCGGGCCACACAGCGCCAGTGGGTTGCTCGCGATT
Amino Acid Sequence
>lipoprotein
MKAMIAVAASLMLAGCASNGTVASSPAQCAKPGSDQELALNLADDMANEGRLYASLANLEGLPEDLVQVRLRKARVLRLMGRSDAEPLYKSLLGTCLAAD AEHGLGQLAAARHDNASATEHLERAAKMAPTEGKIRNDLGVVYLNQRRIPQARFEFMTAMELRQSDTLAAFNMVTLLIYQDNWKQAAELANMARLSPQQI ADAQARAERIRGSADNAVTSPSNRSTEVVDASTGAVK
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site