Pseudomonas frederiksbergensis SI8, JZ00_RS25260

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas frederiksbergensis strain SI8 contig00020, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GTTCGGGCCAGCCGAAGATCGTCAGCGCGGCGCCGGAGAGGTGGCCGCGATTGGCTTTCACCAGGTCGAACTGGCCCTTGCCGTCCTTGTCGGCTTCGTT GCCGGCGGTGCCGAAGTCCAGCGGCACGGTGATGTGGCTGTCGAAGGACAACAGCCGTTCGTGCAATTGCCGAGCTTGCTCCATGACCTTGACGGGGTAG CCGGGGTTGTCCCGCCACCAATGGTCCCAAGCCGCGAGTCCGGCACCGACGACCAGCGCCAGGGCCAGGGGTACGCCGGTAAAAAGAGCCTTTCTAGAAC GTGGTGTTGTCATTGCCGATCTCAGTCTGGTTCGCCTTGGAAGGACAGGCGCGGGGGCCTTTGCTATCTGGGGGGAACGAGTGATCGGGCGGGAAATTTA GGTGTCCTGGGTACCGCCATGGCGGGGCCTGTAAATTTCTCGACCCAGCCATCGTTCTAGCTTGGATAAAGCCCACCCCAGGGCGAACACAGGTAAGGCA
DNA Sequence for Gene
>JZ00_RS25260
ATGACGATTTCTCGACGATGGTTCATGGCAGGCCTGGCGCTGACCGGTGCCGCCGTGCCTGCGGTGTATTACGGACATCGCGAACTGACCCGGCCGGACC CGACCATCACACCCGGCGAGGCTTCCTTCGATGTGGCGGACGTCGCCGGACAGCGTCGGGCAAACACGATGCGGGGCGTCTGGACGATCCGTTTCAGCGG GCGCGATGCCGGCCTCGACGGCTTGCCGGACGACAGCCTGGAGGTGTTCCTCGACATCGCCCACAAAGGCCGAGGCCTGGTGGGTTGCGTCGACACCGCC GAACGCCTGCGTGCTGGGGATGAGCCGCGTTATCGGGTGCTGGGCGACTTGGCTGGCAGCGATCCGAAGCAATTGAGCTGGCGCTTGATCGGCGCCGGGC ATGGCATGCCGGACTACGAGTTCATCATGACCCTCGACGAAGTCTGGGCCGGTTTCGGCAACGCTGGCACGGCCACCCTCAGTGGCCGGGTACTGCGGCT GGATCGCCCGTTGGCGCTGCCGGAACTCGACAATCAGTTCGTCGCCGTCAAACAGCGGTTTCCCGAAGCCCGGGAGCGGACACCGCTGAGTCCCAGGCTG CTGGCCTGGCTGGTGTCGCCGCAGCACCGGCTGTTCCATCAACTCTGGCATGCCTCGCGAGACAAGTGGCACACCCTCGACGAAGACAAACGCGACGCCC TGCGTGGCATCGGCTGGCAACCCGGGCCGCGGGAAAACGAGCGTGATGCCCGTGGGCCGCGCAAGGATCGCAACGGCTCGGGGGTGGATTTCTTTTTCAT GCACCGGCATATGCTCGGCACCGCACGTTCCTTCCAACCGCTGCCGTCATGGTCACGCTTTCCATTGCCACAACCCGACTTGGAGCGTGATCGCCTGGGT TTTGCCCGGTATTTCGATAACGTCGACGGGACGGCGCTGCCACCGACCTGGCTGGCCCGTGGCGACGAGCAATACGCCCAGTGGGTCAGCGACATCAAGA CCGCCGAGACCTATCACAGCAATTTCCAGGTCTGGGAATCCCGTTATCGCGATCCGCGTTATCTGTCGAAACTGACCTTGGGCCAGTTCGGTTCGGAAGT GGAACTGGGCCTGCATGATTGGCTGCACATGCGCTGGGCGTCGGTGCCGCGTGATCCGTCCAACGGCCATCCGGTGCCGTTCGCCCGTGATCAGGCGGAC TTCGCCCAGCGCTGGTTCGAGCCGGAAAACGACTTTCTCGGCGATCCGTTTTCTTCCCACGTGAACCCGGTGTTCTGGGCCTTCCACGGCTGGATCGATG ATCGCATCGAAGACTGGTTCCGGGCCCATGAACGTTTCCATCCGGGCGAAGTGAGTCGGCTTGAAGTCAACGGCGTGCCCTGGTTCGCCCCGGGCCGCTG GGTCGAAATCGCCGACCCGTGGCTGGGTCCGGACACCCATGGCTGCAGCACCACGCCGGGCCTGCAGGCCGGACGTTCGGTGGAGATGGACCCGGAAACC ATGAAGTTGGCGTTACGTATTACGTTTGGCAGCGATGACGACAAGCTGGCGCAACTGTTCCGCCGCGTGCCGCAACGGCCGTGGTATGCGCGCAATCTCA AGGCCAAGGTGGTTTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CCGCTTTCTAGCGGGATGAATGTCATTGTGGTGAGGGGCCTATTTGTGGCGAGGGGATAAATCCCCTCGCCACAAAGTCACTTGGCTTGAGATTTGTTGT GAGGTGTCAGCGCGGCGCGGCGATGTCCAGGGCGCGGTTTGCCAATAGCTCACTCAGCTCGATCATCTGCTGGATCCCCAGGGCAAAGCTTCGTCGTGCG CCTTCCAAATCGAATGCCAGTTCGTTGGCCATGACATTGACCGAGGCGAGGGTTTCGCTGAGGTTGGCCAATAGACACTCCATGTCCGCGCCTTCCGCCA CGGTGAATAACTGGTCCGGTGGTGGCTTGGGTGTTTCGGGCTTGGGGTCGAGGTAGTAGGCGAGGGCGCGGTCGGCGGCTTCGTCGAGTTTTTTGGAATC GTCGTCGGGAGGATTGGGGTGATCTTGAACATGGTGAAACTCCTAGTATTCATTTTCAGGAGCCGACACCCTCGCTACCAAACGATTGGGTGGCGGCCGT
Amino Acid Sequence
>PvdJ/PvdD/PvdP-like protein
MTISRRWFMAGLALTGAAVPAVYYGHRELTRPDPTITPGEASFDVADVAGQRRANTMRGVWTIRFSGRDAGLDGLPDDSLEVFLDIAHKGRGLVGCVDTA ERLRAGDEPRYRVLGDLAGSDPKQLSWRLIGAGHGMPDYEFIMTLDEVWAGFGNAGTATLSGRVLRLDRPLALPELDNQFVAVKQRFPEARERTPLSPRL LAWLVSPQHRLFHQLWHASRDKWHTLDEDKRDALRGIGWQPGPRENERDARGPRKDRNGSGVDFFFMHRHMLGTARSFQPLPSWSRFPLPQPDLERDRLG FARYFDNVDGTALPPTWLARGDEQYAQWVSDIKTAETYHSNFQVWESRYRDPRYLSKLTLGQFGSEVELGLHDWLHMRWASVPRDPSNGHPVPFARDQAD FAQRWFEPENDFLGDPFSSHVNPVFWAFHGWIDDRIEDWFRAHERFHPGEVSRLEVNGVPWFAPGRWVEIADPWLGPDTHGCSTTPGLQAGRSVEMDPET MKLALRITFGSDDDKLAQLFRRVPQRPWYARNLKAKVV
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site