Pseudomonas frederiksbergensis SI8, JZ00_RS21510
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas frederiksbergensis strain SI8 contig00013, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GGACAACTGAAGCGAAACTTCCACTGGTTGCCGGTTCGCTCGGTGATCTGCTGCTTGCAGCCCGACTGCGGGTCCTGCAACGGGATGTCGTTCGTCTGGA CTTGCTCCGGGGTCAGGCATACCCGAATACCTTTGCCGCCCATGGTAATGCCTTGCTTTTCCAACATGGCCCGCTGCTCGGGTGTCATCTGGTTCTGCAA CTGGCCGAGGATCAATTGCAGGTCTGGCAAGTTCTGGTTGTCGACTTTCATGTTGCTTGTCGTCAGTTCCCACAGGCCTGGTTGAAGCATCTGCGCCTGC GCCGCTACAGGAACCGACAAGCCAACGGCCAAGGCCACACCCAGCAAGCGAACTTTCATTGCAAAAACTCCAGAGGACAAGTGGCCGTTAGACGCTGCCC ACAGGCTTCGGTTCAAGGCCCGGCCAGGTGAATTAAATAGCGACATTCGCTGCGGAACATGGTCTGTTAAGCAATGAAACTTCAGGAGCTCGGCTGCCCC
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| DNA Sequence for Gene |
>JZ00_RS21510
ATGGATTATTACGGCCCGCATGTTTTCGGTTACCTGATCGCGCTGCTCCATACACTCGGCTCCATCGCCGCCGTCCATGCGGTACTCACCGTGCGAACCG CCCAAGGATCGATTGCCTGGGCCCTTTCATTGCTGTTCATTCCCTATCTGACGTTGATCCCCTACTTGGTTTTCGGCCGCAGCACTTTCGACGGCTACAT CAAGGCGCGACGGCAGGCGAACGAAGAAATGCGCAAGGCGATTTCCGAGCTGAACTGGCGACCCTGGGTCGAAGAAGCACTCACCGCTCGCGCCTCCCAG GCCTATGCTTCGTTGCGCGCCATGCCCAAGCTAGGGCGAGCACCCTGCCTGGCGAATAACCAGGTGCGGTTGCTGGTAGACGGCCACGCCACGTTCGAAG CGATTTTCCAAGCCATCGAAGGCGCGCGGGAAGCCATCCTGATCCAGTTCTTCATCATCCATGACGACCGCCTCGGCCAGCGCCTGCACGCATTGCTTTT GAAGAAAGCGGCCGAAGGCGTGACGGTGTACCTGCTGTACGACCGTATCGGCAGTCACTCCCTGCCCCACCGATATGTCCAGGCATTGCGCGACGGCGGC GTCCATGTGAAAGCCTTTGCCACCCGCAGCGGTTGGTTGAACCGGTTCCAGGTCAACTTCCGCAACCATCGCAAGATCGTAGCCGTGGACGGCGTACTGG GGTTTGTCGGCGGGCATAACGTAGGCGACGAGTACCTTGGCGAAAAGCCCCCGCTGGCGCCATGGCGCGACACGCATGTCGAAGTACGCGGCCCGGTGGT GGCAAGCATGCAGGAGTCGTTCGCAGAAGACTGGTTCTGGGCCGCCCGTTCTTTGCCGCCATTGATCCTGCCGGATACTTACCCGGACGGCGGCGTGCTC TGCCAGTTACTGGCCAGCGGCCCGGCGGACGCGCACGAAACCTGCTCGCTGTTTTTCGTCGAGGCGATCCATGCGGCGAACGAGCGGATCTGGATTACCA CACCCTATTTCATTCCCGATGAAGCGGTCTTCGCTGCGCTGCGCCTGGCAGTCTTGCGCGGGGTGGATGTACGCATCCTGCTGCCATCACGTCCCGATCA CAAAATCGTCTACGCAGCGTCCAGCCTTTATGCATTCGAGGCCGTAAGGGCCGGCGTGCGGGTGTTTCGTTATGAGCCAGGATTCCTGCATCAGAAAGTC GTGTTGATCGATCAGGAAATAAGCGCGATCGGCAGCGCGAACCTGGACAACCGTTCGTTTCGATTGAATTTTGAAGTGATGCTGCTGACGGTTGATGTCG CATTCGCCAGCGAAGTGGAGCAGATGCTCGAGAAAGATTTTGCCCAGGCCCACGAAGTCGCGAAACAGGAAAGCCGGGAGACCCACCGCGTGCAAAAGAT CGGCATGCGGATCGCCCGGCTCATTTCGCCGATTCTTTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGCGCGTAGATGTCGTCCCGCGTCCAGGGCAATTCATGGCTGCCATCGGCATGGGCCTTGACCGCGAGGATCTGGTGCAGGTTTATCCAGCCCTTGGCGA AGGCATAGGCGCAGCCTGCCAGATAAAGCCGCCAGATCCGCAGCGCCCGCTCCGGCACCTCCCTGGAGGCGGTTTCGAGGTTGTCCTCCAGACGCTCGCT CCAATGATCGAGGGTGCGCGCGTAATGCATGCGCAGGCTTTCCACATCGACGATTTCCAGCCCGGCTTCGCTGATCTCGGCAGAGATCATCGAGAGATGC GGCAACTCACCATTGGGAAATACATATTTCTCAATGAACTCACCCGCACCACGCCCTACCGGACGGCCATCGGTGTGCTTGGCGGTGATTCCGTGATTCA TCACCAGGCCCCCTTCGCGAACGGCGCCGAACAGCGTCTTGCAGTACTGGGCCAAGTTGGCGTGCCCGACGTGTTCGAACATACCGACGCTGACGACCTT
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| Amino Acid Sequence |
>cardiolipin synthetase
MDYYGPHVFGYLIALLHTLGSIAAVHAVLTVRTAQGSIAWALSLLFIPYLTLIPYLVFGRSTFDGYIKARRQANEEMRKAISELNWRPWVEEALTARASQ AYASLRAMPKLGRAPCLANNQVRLLVDGHATFEAIFQAIEGAREAILIQFFIIHDDRLGQRLHALLLKKAAEGVTVYLLYDRIGSHSLPHRYVQALRDGG VHVKAFATRSGWLNRFQVNFRNHRKIVAVDGVLGFVGGHNVGDEYLGEKPPLAPWRDTHVEVRGPVVASMQESFAEDWFWAARSLPPLILPDTYPDGGVL CQLLASGPADAHETCSLFFVEAIHAANERIWITTPYFIPDEAVFAALRLAVLRGVDVRILLPSRPDHKIVYAASSLYAFEAVRAGVRVFRYEPGFLHQKV VLIDQEISAIGSANLDNRSFRLNFEVMLLTVDVAFASEVEQMLEKDFAQAHEVAKQESRETHRVQKIGMRIARLISPIL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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