Pseudomonas frederiksbergensis SI8, JZ00_RS20840 (fliN)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas frederiksbergensis strain SI8 contig00012, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GAGTACATCAACTCGGAGGTGAACCCGGCGATGGCCAACATCGTCGGCCCGAGCGAAGCCATTGTCGTCTCGACGTTCCATATCGAGCTGGACGGTGGCG GCGGCGACCTCCACGTGACCATGCCGTATTCGATGATCGAGCCGGTGCGCGAAATGCTCGACGCCGGTTTCCAGTCGGACCTCGACGATCAGGACGAACG CTGGATCAACGCCTTGCGCCAGGACGTGCTGGATGTCGACGTGCCAATCGGTGCGACGGTCGCCCGGCGCCAGCTGCGACTGCGGGACATCCTGCACATG CAGCCAGGGGACATCATCCCCGTCGAGATGCCGGAAGACATGATCATGCGCGCCAATGGCGTGCCGGCCTTCAAGGTCAAGATGGGCTCTCACAAAGGCA ACCTGGCGTTGCAGGTGATCGAGCCGATCGAACGCCGCTGAGCGGTGTCAACTTCTTAAGTTTTGGTTTTTAACTGATTTTTGCCCGCCGAGGAAACATG
DNA Sequence for Gene
>JZ00_RS20840 |fliN
ATGGCTGACGATATGAATACCCAGGATGACCAGGCGCTGGCCGATGAATGGGCTGCGGCCCTGGAAGAAACCGGCGATGCCGGGCAGGCTGACATCGATG CATTGCTGGCGGCCGACACTGGTAATCACGCTTCCAACCGTCTGCAGATGGAAGAGTTCGGCAGCGTGCCGAAAAGCAACGAACAAGTGACCCTCGATGG TCCCAACCTTGACGTGATCCTCGACATCCCGGTGTCGATTTCCATGGAAGTTGGCAGCACCGATATCAACATCCGCAACCTGCTGCAGCTCAACCAGGGC TCGGTGATCGAGCTGGATCGCCTCGCCGGTGAGCCGCTGGATGTGCTGGTCAACGGCACCCTGATCGCCCATGGCGAAGTGGTGGTGGTCAACGAGAAGT TCGGCATTCGCCTGACGGACGTGATCAGCCCGAGCGAACGCATCAAGAAGCTGCGCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
ATGAAAGGCTTTATCGCCGCAGCCTTGATGCTGCCGTTCAGCGTGTTGGCTGCCGAGCCGGTGGCCACTGCGGCCGTTGCGCCGGCGAGTGGCAGCGGCG TGGCCGGGCAGTTGGCGCAACTGGTGCTGGGCCTGCTGGTCGTGCTCGGGTTGATTTTTTTCCTGGCGTGGATGCTGCGGCGGGTGCAGCAGGCGGGGCC TGCCGGTAAAGGGCAGGTCATCGACATCGTCGGTTCACGCGCGCTGGGCCCGCGTGATCGGCTGGTGCTGGTGCAGGTCGGCAACGAGCAGATCCTGCTT GGCCTGAGCCCTGGCAGCATCACTGCATTGCATGTCCTCAAGGAGCCGGTGCAGGTGCCCACCACCGAGCAGGCCACGCCCGAGTTTGCCCAACGGCTCA TGGAACTGCTGGGAAAAGACCAAAAGGATAAAAAGTAATGCCGTTGCGCATTCTGTTGGCGTTGGCCCTGATGCTGGCCGCGCCGCTGGCGTTCTCCGCC
Amino Acid Sequence
>flagellar motor switch protein
MADDMNTQDDQALADEWAAALEETGDAGQADIDALLAADTGNHASNRLQMEEFGSVPKSNEQVTLDGPNLDVILDIPVSISMEVGSTDINIRNLLQLNQG SVIELDRLAGEPLDVLVNGTLIAHGEVVVVNEKFGIRLTDVISPSERIKKLR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site