Strain | Pseudomonas frederiksbergensis strain SI8 contig00010, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
ACCCGGCCGTTGCACATGGTCCTGGCCAAGGGACCGAGCCTCAAGCCCCTGTATGCCCATTGCCTGGGCGGCGGGCCTAAGCCACGGGTAACCGTGACCA CTCATCCAGCCGCCGATGGCCAATGGGTCTGGTACCTGGGAGGCGATCTCGCCGAGGGGGATGCCGTTGCCCGCGAGCCCGCCGCGCAGATCGCCGTCGC CCAGAAGGAGCTCGGCCAACTGCTTCCGTGGATCGACCTCAGCACCGCGCAATGGGCCACGTTGCGGGTCGCCCGCGCCGAGCCGCTGCAATCGGGCCTG ACCCGCCCGGATAATGCCTTCGTCGCCGAGCAGGATCGCCTGCTGGTGGGCTGGCCGACCAAATTGGCCTTGGCCCCGGACTTTTCTGATCGGGTGATCG CCGCGCTGCAGCGCGACGCCATCCAACCCAGCCATTCCACTCCGCTGCCGGACCTGCCAAAGCCGCCGATGGGCGTTCCCGCCTGGGACCAATTACTGCC
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DNA Sequence for Gene |
>JZ00_RS18860
ATGAGCCTGCCAACACTCCACGATCTGCACCGCCCGCTGGGCAACAACGGCCCGATGGTCTCGCCCCTGGGCCTGGGCACCGTCAAGCTTGGTCGCGACC AGGGCGTGAAATACCCCAACGGCTTTCAGATTCCCGATGACGACGAAGCGCGCATGCTGCTCAAGCTGGCCCGCGACCTGGGCATCAACCTGATCGACAC CGCGCCGGCCTACGGTCGCAGCGAGGAGCGCCTCGGCCCGCTGCTACGCGGCCAACGCCAGGACTGGGTGATCGTCAGCAAGGTTGGCGAGGAATTCAGC GACGGCCAGTCACGCCATGATTTCAGCGCCGCCCATACGCGATTCTCGGTAGAGCGCAGCCTCAAGCGCCTGGAAACCGACCATATCGACCTGGTGCTGG TACATTCCGATGGCAACGACCTGGCGATCCTCAACGACAGCGAGGTCTACCCGACCCTGGCGGCGCTCAAGCGCGAGGGCAAGATCGGCGGCTTCGGCTT TTCCGGCAAGACCGTCGAAGGTGGCTTGAAAGCCCTGGAGCAAGGTGATTGTGCGATGGTCACCTACAATCTGAACGAACGAAACGAAAAGGCTGTCATT GACTACGCCAGCGAGCACGGCAAAGCGATCCTGGTGAAAAAAGCCCTGGCCAGCGGTCACGTCTGCCTGAGCCCCGGGGTAGACCCGGTTCGCGCCAGTT TCGAACTGTTGTTTGAGCATCCTGGGGTCGCCAGTGCTATTGTCGGCACGATCAATCCGCTGCACCTCGCCCATAACGTCGCGACCGTCGCCAAGGTCCT GCGTAAAAACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CGCCGCCCTACGCGGCCTAAAGGAAGGAGCCGACATGCCGCGTACGCTCATCAGGAAAAATCCAAGCAACTTCAAGACTCTGCCCCTTTTCGTCGAAGCG ACTCCCGAAGGCCTGACTTACCAGAGCGTGGGGATGCCGCTCAACTTTGCCCAGACCTTGCAGCGGCGGCGTCCCATGACCGTGGACGATGCCGAACGCT TTTCCGTGGAGCTGGCGAACCTGGGCGTCTCGGTGCGCCTGACCCTGCATTGGCAGAACCGTGAATATTGGGTGCTCGTGCGTCAACGCCGGCAGGATCG CGGCGATGTGGTGCTCAAGCTGATCTCGGGCTACGTCCCGGCTCATGAGCTGAATCTGCCGCTGCTTACCGCTATCAACGAAATAGCCGAAGAATGCCTG TTGGAAACGCCGGAAGGTTGGCTCGGTGGACGCTTCAACGACACCTGGCTGCCGGCTCCTTACGCCACGGCCCTGCATTACCGCGAAGCCTTGCCGTTTC
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Amino Acid Sequence |
>aldo/keto reductase
MSLPTLHDLHRPLGNNGPMVSPLGLGTVKLGRDQGVKYPNGFQIPDDDEARMLLKLARDLGINLIDTAPAYGRSEERLGPLLRGQRQDWVIVSKVGEEFS DGQSRHDFSAAHTRFSVERSLKRLETDHIDLVLVHSDGNDLAILNDSEVYPTLAALKREGKIGGFGFSGKTVEGGLKALEQGDCAMVTYNLNERNEKAVI DYASEHGKAILVKKALASGHVCLSPGVDPVRASFELLFEHPGVASAIVGTINPLHLAHNVATVAKVLRKN
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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