Pseudomonas frederiksbergensis SI8, JZ00_RS18325

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas frederiksbergensis strain SI8 contig00009, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
AATCAAGCTCGCCGTATTCGACGTCGACGGTGTACTCACCGACGGCCGCCTGTACTTCCTCGAAGATGGCAGCGAATTCAAGACCTTCAACACGCTCGAC GGCCAAGGCATCAAGATGCTGATGGCCTCAGGCGTGCAGACCGCCATTATCAGTGGTCGCAAGACGCCGGTGGTGGAGCGACGGGCGAAGAATCTCGGCA TCCCGCACCTTTACCAGGGCCGCGAAGACAAACTGGTGGTTTTGGACGAGCTCCTTGGCCAACTCAATCTAAGCTATGAACAGGTCGCCTACCTGGGTGA CGACCTGCCGGACCTGCCGGTCATCCGCCGGGTCGGTTTGGGCATGGCCGTGGCCAACGCCGCTGCGTTCGTGCGCGAGCATGCCCATGGTGTCACCACG GCAAGGGGCGGCGAAGGCGCAGCCCGCGAATTCTGTGAACTGATCCTGCGTGCCCAGGGCCACCTCGAAGCGGCCAACGCCGCATACCTGTGAGCCATTT
DNA Sequence for Gene
>JZ00_RS18325
ATGCTAAGCAAGAAGATTCGCACCCTCCTGGTGTTCAGCTGTATCGCGGCGATTTTCGCTGCGGTGGGCTATTGGAACATCAGCCCGGAACGCTTCCTGG ACCAGCCAGCGGCCAAGGTCGAGGAGAACATCGACTGGTACGCAACCAATACGCACACCCTGCAGTACTTGCCCGACGGCAAGCTGCAGTACGAAATGAC ATCCGACAAGGTCGATCACGTGAAGGCGACTGATATCACGCTGGTCACCAAACCGGACCTGAACATGTTCCGGGGCACCGAGTTCCCATGGCATGTCCAG AGTGAGCGCGCCGAGGTCAATCCCGGCGGCACCGAGGTCGAACTGATCGACTCGGTGCGCATCACCCGGACCGACGAAAAGAACCGTACGACCCTCATCA CCACCAGTCGCATGACGGTCTTCCCGCAACGAGAATATGCGCAGACCGAGCAACCCGTTAGAATCGACGGCGCTGGCGGCGTATCGACCGGCACGGGAAT GAAGGCGTATTTGAAGGAAAGCAGGATACACCTGCTATCGAAAGTAAGAGGACAGTATGAAGCTCGCTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
AACCCTCCCTATTTTGCTCAGTCTGGGCGCAGCACTGGGAAGCGCGAGCGCCTGGGCCCTTCCCAACGACCGCGACCAGCCTATCCGCATCCAGGCCGAC GACGCGCAACTGGATGACAAGAACGGTGTCGCCACCTATAAGGGTGATGTAATCATCACCCAGGGCTCGATGAAGGTGACCGGCAACACCGTGACCATCA CCCGCACCCAATCCGGCGACATCGACGTAGTGACTTCGGTGGGCAACCTGGCCTACTTCGAACAACTGCAAACCGCAGGCGACACCAAGCCCGTGCAAGG CTACGGGGTCACCATCCAGTATCACGCCGCCCAGGACCGCGTTGTATTGATCGATCGCGCCAAGGTCGTCGACAAGGACAACAACGTGACCCAAGGCGAG AAAATCGTCTACGACACGGTCAAGAAACTGGCCAGCGCCGGTCGCGCCACTGGCAGCAAGGTCACCGAGGCGCGTCCGCGCATCGACATGGTGATCCAGC
Amino Acid Sequence
>LPS ABC transporter permease
MLSKKIRTLLVFSCIAAIFAAVGYWNISPERFLDQPAAKVEENIDWYATNTHTLQYLPDGKLQYEMTSDKVDHVKATDITLVTKPDLNMFRGTEFPWHVQ SERAEVNPGGTEVELIDSVRITRTDEKNRTTLITTSRMTVFPQREYAQTEQPVRIDGAGGVSTGTGMKAYLKESRIHLLSKVRGQYEAR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site