Pseudomonas frederiksbergensis SI8, JZ00_RS17795 (carB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas frederiksbergensis strain SI8 contig00009, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GCGACTACGCAATCCAGGCGATCAAGGATGTGCTGGAAACCGAGATCCCGGTCTTCGGTATCTGCCTCGGCCACCAGTTGCTGGCCCTGGCTTCGGGCGC CAAGACCCTGAAAATGGGCCACGGCCACCACGGTGCCAACCACCCGGTCCAGGACCTGGACACCGGCGTGGTGATGATCACCAGCCAGAACCATGGTTTC GCCGTGGATGAGGCGACCCTGCCGGCCAACGTCCGTGCGATCCACAAATCGCTGTTCGACGGCACGCTGCAAGGTATCGAGCGTACCGACAAGAGCGCGT TCAGCTTCCAGGGCCACCCTGAAGCGAGCCCGGGCCCGAACGATGTGGCGCCGCTGTTCGATCGCTTCATCAACGAGATGGCCAAGCGACGCTGACCGCG CGAAGCCCGAGGGCGGCCCCGAATGCGGTGGCCCCCTCGGGCGCTTCAAAGATTGTTCGACGGCCTAGCCGACTGACCTGCGGATTTGAGTGACAAACCC
DNA Sequence for Gene
>JZ00_RS17795 |carB
ATGCCAAAACGTACAGACATAAAAAGCATCCTGATTCTCGGCGCCGGCCCGATCGTGATCGGCCAGGCCTGCGAATTCGACTACTCCGGCGCCCAGGCCT GTAAAGCCCTGCGCGAAGAGGGCTATCGCGTCATCCTGGTGAACTCCAACCCGGCCACCATCATGACCGACCCGGCCATGGCCGATGCCACCTACATCGA GCCGATCAAGTGGCAGACTGTCGCCAAAATCATTGAGAAGGAGCGCCCGGACGCACTGCTGCCGACCATGGGCGGCCAGACCGCGCTGAACTGCGCCCTG GACCTGGAGCGCGAAGGCGTCCTGGAAAAATTCGGTGTGGAAATGATCGGTGCCAACGCCGACACCATCGACAAGGCCGAAGACCGCTCGCGCTTCGACA AGGCGATGAAATCCATCGGCCTGGACTGCCCACGCTCGGGCATCGCCCACAGCATGGAAGAGGCCAACGCCGTCCTGGAGCGCCTTGGCTTCCCGTGCAT CATCCGTCCGTCCTTCACCATGGGCGGCACCGGTGGTGGCATCGCCTACAACCGTGAAGAGTTCGAAGAAATCTGCGCCCGTGGTCTCGACTTGTCGCCG ACCAAGGAACTGCTGATCGACGAATCGCTGATCGGCTGGAAAGAATATGAGATGGAAGTTGTCCGCGACAAAAAGGACAACTGCATCATCGTCTGCTCCA TCGAGAACTTCGACCCGATGGGCGTGCACACCGGCGACTCGATCACCGTCGCACCGGCCCAGACCCTGACCGACAAGGAATACCAGATCCTGCGTAACGC CTCCCTGGCGGTGCTGCGCGAGATCGGCGTGGAAACCGGCGGCTCCAACGTCCAGTTCGGCATCTGCCCGAACACCGGTCGCATGGTGGTCATCGAGATG AACCCGCGGGTATCCCGTTCGTCGGCGCTGGCGTCGAAAGCCACCGGCTTCCCGATCGCCAAGGTCGCTGCCAAGCTGGCCGTGGGCTATACCCTGGATG AGCTGTCGAACGACATCACCGGCGGCAAGACCCCGGCGTCCTTCGAGCCGTCCATCGACTACGTCGTGACCAAGCTGCCACGCTTCGCCTTCGAGAAGTT CGCCAAGGCCGACGCCCGCCTGACCACTCAAATGAAGTCGGTCGGTGAAGTCATGGCCATCGGCCGGACCTTCCAGGAATCCCTGCAGAAAGCCCTTCGC GGCCTGGAAGTGGGCGTTTGCGGCCTCGATCCAAAGCTGGACCTGAGCAACCCGGAAAGCATGAGCGAGCTCAAGCGCGAGCTGACCGTGCCGGGTGCCG AGCGTATCTGGTACGTGGCCGATGCCTTCCGCGCCGGCATGACCGTCGAGCAGATCTTCGGCATGAACATGATCGACCCTTGGTTCCTGGTACAGATCGA AGATTTGATCAAGGAAGAAGAGAAGGTCAAGACCCTGGGCATGTCCAGCATCGACCGCAACACGATGTTCCGTCTCAAGCGCAAGGGTTTCTCCGACATG CGCCTGGCCAAGCTGCTGGGTGTGACCGAGAAGAGCCTGCGTGCCCATCGCCACAAGCTGGAAGTGTTTCCGGTCTACAAGCGCGTCGACACCTGCGCGG CCGAGTTCGCCACCGACACCGCTTACCTGTACTCCACATACGAAGAAGAGTGCGAAGCTGCGCCTTCGACCCGCGACAAGATCATGATCCTGGGTGGCGG TCCTAACCGGATCGGCCAGGGTATCGAGTTCGACTACTGCTGCGTACACGCGGCACTGGCCCTGCGCGACGACGGTTACGAGACCATCATGGTCAACTGC AACCCCGAAACCGTCTCCACCGACTACGACACCTCCGATCGCCTGTACTTCGAACCAGTGACCCTGGAAGACGTGCTGGAAATCGTCCGCGTCGAGAAGC CAAAAGGCGTGATCGTCCAGTACGGCGGCCAGACTCCTTTGAAACTGGCTCGCGCCCTTGAAGCTGCTGGCGTGCCGATCATCGGCACCAGCCCGGATGC GATCGACCGTGCCGAAGACCGCGAGCGCTTCCAGCAGATGGTCGAGCGCCTGAACCTGCGTCAGCCGCCAAACGCCACCGTGCGCAGCGAGGACGAAGCG ATTCGTGCCGCCGCCAAGATCGGTTACCCGCTGGTGGTGCGTCCGTCCTACGTCCTGGGCGGTCGTGCGATGGAAATCGTCTACCAGGAAGACGAACTCA AGCGCTACCTGCGCGAAGCGGTCCAGGTGTCCAACGACAGCCCGGTGCTGCTGGACCACTTCCTCAACTGCGCCATCGAAATGGACGTGGATGCGGTCAG CGACGGCAAGGATGTGGTGATTGGCGCGATCATGCAGCACATCGAGCAAGCCGGCGTTCACTCCGGTGACTCCGCTTGCTCGCTGCCGCCATACTCGCTG CCTGCACACATCCAGGACGAAATGCGCGAGCAGGTCAAGAAAATGGCCCTGGAACTGGGTGTCATCGGCCTGATGAACGTACAGCTAGCCCTGCAGGGCG AAGACATCTACGTCATTGAAGTCAATCCGCGCGCTTCTCGGACCGTACCGTTCGTTTCCAAGTGCATCGGTGTTTCCCTGGCGATGATCGCGGCCCGCGT AATGGCTGGCAAAACCTTGCAAGAGCTCGGCTTTACCAAGGAAATCATCCCGAACTTCTACAGTGTCAAGGAAGCGGTGTTCCCGTTCGCCAAGTTCCCA GGTGTCGACCCGATCCTCGGCCCGGAAATGAAATCCACTGGCGAAGTGATGGGCGTGGGCGACACCTTCGGTGAAGCCTTCGCCAAGGCCCAGATGGGCG CCAGTGAAGTGTTGCCGACGGGTGGCACGGCGTTCATCAGCGTGCGTGATGACGACAAGCCACTGGTTGCAGGCGTGGCCCGTGATCTGATCAACTTGGG CTTCGAAGTGGTCGCAACTGCCGGTACTGCCAAGCTGATCGAAGCAGCAGGCCTGAAAGTTCGCCGCGTGAACAAGGTGACCGAGGGCCGTCCGCACGTG GTCGACATGATCAAGAATGACGAAGTCACGCTGATCATCAACACCACCGAAGGTCGCCAGTCGATCGCCGATTCCTATTCCATTCGTCGCAACGCGCTGC AGCACAAGATCTACTGCACCACGACCATTGCGGCAGGCGAAGCGATCTGCGAAGCACTCAAGTTCGGTCCCGAGAAGACCGTGCGTCGCTTGCAGGATCT ACATGCAGGATTGAAGGCATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCATAACCAAGTACCCCATGACAGTTCAGGGCGCGAAGGCCCTGGAAGAAGAACACGCTTTCCTCACCAAGGTCGAGCGCCCGCGCTTGAGCCAGGCTAT TGGCGAAGCGCGTGAGCTGGGCGACCTGAAGGAAAACGCCGAATACCACGCTGCCCGAGAGGAGCAGGGTATGGTCGAGGCGCGTGTCCGTGACATCGAA GGCCGCATGCAGAATGCAGTGATCATCGACGTCACCACGATCCCGCACACTGGCAAAGTGATTTTCGGCACCACCGTGGAAATCGCCAACGTCGAGACGG ATGAAAGCGTTACTTACCAGATCGTTGGCGAGGACGAGGCAGACATCAAGCTCGGCAAGATTTCAGTGGGTTCACCTATCGCTCGCGCCTTGATCGCCAA GGAAGAGGGTGATGTGGTTGCCGTGAAGACGCCTGGCGGTGTCATCGAGTATGAGATTGTCGAAGTCCGTCATATCTGAGCGAAGGCGTCCGCTGCGCGC
Amino Acid Sequence
>carbamoyl phosphate synthase large subunit
MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPAMADATYIEPIKWQTVAKIIEKERPDALLPTMGGQTALNCAL DLEREGVLEKFGVEMIGANADTIDKAEDRSRFDKAMKSIGLDCPRSGIAHSMEEANAVLERLGFPCIIRPSFTMGGTGGGIAYNREEFEEICARGLDLSP TKELLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDPMGVHTGDSITVAPAQTLTDKEYQILRNASLAVLREIGVETGGSNVQFGICPNTGRMVVIEM NPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELSNDITGGKTPASFEPSIDYVVTKLPRFAFEKFAKADARLTTQMKSVGEVMAIGRTFQESLQKALR GLEVGVCGLDPKLDLSNPESMSELKRELTVPGAERIWYVADAFRAGMTVEQIFGMNMIDPWFLVQIEDLIKEEEKVKTLGMSSIDRNTMFRLKRKGFSDM RLAKLLGVTEKSLRAHRHKLEVFPVYKRVDTCAAEFATDTAYLYSTYEEECEAAPSTRDKIMILGGGPNRIGQGIEFDYCCVHAALALRDDGYETIMVNC NPETVSTDYDTSDRLYFEPVTLEDVLEIVRVEKPKGVIVQYGGQTPLKLARALEAAGVPIIGTSPDAIDRAEDRERFQQMVERLNLRQPPNATVRSEDEA IRAAAKIGYPLVVRPSYVLGGRAMEIVYQEDELKRYLREAVQVSNDSPVLLDHFLNCAIEMDVDAVSDGKDVVIGAIMQHIEQAGVHSGDSACSLPPYSL PAHIQDEMREQVKKMALELGVIGLMNVQLALQGEDIYVIEVNPRASRTVPFVSKCIGVSLAMIAARVMAGKTLQELGFTKEIIPNFYSVKEAVFPFAKFP GVDPILGPEMKSTGEVMGVGDTFGEAFAKAQMGASEVLPTGGTAFISVRDDDKPLVAGVARDLINLGFEVVATAGTAKLIEAAGLKVRRVNKVTEGRPHV VDMIKNDEVTLIINTTEGRQSIADSYSIRRNALQHKIYCTTTIAAGEAICEALKFGPEKTVRRLQDLHAGLKA
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site