Pseudomonas frederiksbergensis SI8, JZ00_RS17050

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas frederiksbergensis strain SI8 contig00008, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GTTCGACGGTTTCCCGCGCACCATTCCCCAGGCGGAAGCCTTGGTGACTGCCGGTGTCGAGCTCGATCATGTTGTCGAGATCGCCGTCGATGACGAAGAA ATTGTCCAGCGCATTGCCGGCCGTCGCGTCCATGAAGCGTCGGGCCGTGTTTATCACACCGTCTACAACCCGCCAAAAGTTGCCGGCAAGGACGACCTGA CTGGCGAAGAGCTGGTGCAGCGCAAGGACGATACCGAAGAAACCGTGCGTCATCGCCTGTCGGTCTACCATTCCCAGACCAAGCCGCTGGTGGACTTTTA CCAGAAGCTGTCCGAGAAAACCGGCGGCAAGCCGAAGTACAGCCACATCCCGGGCGTTGGCTCGGTCGATGCGATTACCGGCAAGGTGCTTGAAGCGCTG AGCTGAAAAGCCTGATCCGCTGCATCAACTACGGCCCGCTTGCGGGCCGTAGTTGTTTATACTGGCGCACTTTTTCCCCACCTGATTTACGGACACATCG
DNA Sequence for Gene
>JZ00_RS17050
ATGAGCACCTTGCTGGCCCTGGACACCGCGACCGAAGCTTGCTCCGTTGCCTTGCTGCATGACGGCAAGGTCACGAGCCATTACGAGGTGATCCCGCGTT TGCATGCGCAAAAATTGCTGCCGATGATCCAGCAACTGCTTGCCGATGCTGGCATCACCTTGCAGGCAGTGGATGCAATCGCCTTCGGTCGCGGGCCTGG CGCGTTCACCGGCGTGCGTATTGCCATCGGTGTCGTGCAAGGGTTGGCCTTTGCCCTGGAACGCCCGGTATTGCCGGTGTCGAACCTGGCGGTGCTGGCC CAGCGTGCCTTGCGCGAACACGGTGCGCATCAGGTGGCGGCCGCGATCGATGCACGCATGGACGAGGTGTACTGGGGCTGCTATCGCGAAACCGACGGCG AGATGCGCCTGGTCGGTGCTGAAGCGGTATTGCCGCCCGAATCGGCGGCGTTGCCGGTTGAGGCGAGTGGCGAGTGGTTCGGCGCCGGTACGGGCTGGGG TTATGGTGAACGGATCGGTGCCCGCGTTGCCGGCGAGGACGCCTCCATGTTGCCTCATGCCGAAGACTTGCTGGCGCTCGCACGCTTCGCCTGGGAACGC GGCGAGGCCATCCCGGCCGATGAGGCGCAGCCGGTTTACCTGCGGGACAAGGTCGCAACGCCCAAATCCGAGCGCTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CCGGCATCACCCCATCCCAAGCCGAGCACAATTGTGGCGAGGGGATTCATCCCCGCTGGACGCGTAGCGCCCCCGACATTGTTGCGTCAGATGCGGATCT GGCGAGTGCTGCGGACTCGAGCGGGGATAAATCCCCTCGCCACACCGTAATACCTGATCCCGGAAACCCAAACCAAAAAGTCATTTCCCACCCGAAAGTC ACACCCGACCTTGCCAGTCGTCACTTTTTTAGTCCGTTTTTAAACCTTTTTGGCTTTATGTGTTCTAGTTATCACTTGCGCATTTGCGCGGCTACGAATG TGCCGCTAAATTGCCATCATTGATACCGAGCATTCTGTCATGCGTATAGACGGCGTTTCATCTCAGTCCTACCCCATCAAGCGTCGGCCTCGTACGGGTA AAGCCGTTGAGCCCGAAAACTTCGATGACCTCGATGGCGACCTGGAATTTCCGTCCGAAGAGCAACTGGCCGCCCGCGCTGCCAAAGCCTCGGCGCAACG
Amino Acid Sequence
>peptidase M22
MSTLLALDTATEACSVALLHDGKVTSHYEVIPRLHAQKLLPMIQQLLADAGITLQAVDAIAFGRGPGAFTGVRIAIGVVQGLAFALERPVLPVSNLAVLA QRALREHGAHQVAAAIDARMDEVYWGCYRETDGEMRLVGAEAVLPPESAALPVEASGEWFGAGTGWGYGERIGARVAGEDASMLPHAEDLLALARFAWER GEAIPADEAQPVYLRDKVATPKSER
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site