Pseudomonas frederiksbergensis SI8, JZ00_RS15810

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas frederiksbergensis strain SI8 contig00007, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
AGCACCCGGGCCAGCTCTCCGGCGGCCAGCAGCAGCGCGTGGCGATTGCCCGTGCGCTGGCGATGGACCCGGTGGTCATGCTCTTCGACGAACCAACCTC GGCCCTTGACCCGGAAATGGTCAACGAAGTGCTCGACGTGATGGTGCAACTGGCCCACGAAGGCATGACCATGATGTGCGTGACCCACGAAATGGGCTTC GCCCGCAAAGTCGCGAACCGGGTGATCTTCATGGACCAGGGCCAGATCATCGAGGACTGCCCCAAAGAAGAGTTCTTCGGCGACATCAGCGCCCGCTCCG AACGCGCGCAGCATTTCCTCGAGAAGATCCTGCAGCACTAAAAACACCGCTTCCTGCGGTGGGAGCGGACTTGCTCGCGAAGAGGGCAGCACATCCAACA TCGATGTGTCTGATACACCGCCTTCGCGAGCAAGCCCGCTCCCACAGTGGATCGGAGTTGGCTTGTCGATTTGTGTTGTGGTTGACCCAAGGCTTCTGTG
DNA Sequence for Gene
>JZ00_RS15810
ATGAAATGCGACCCCACCCTTTATCGCGCCGCGCCGCCATCACTCGCCGTGAAACCCCGCCTGATCCGCCACCTGTTCCTGCCGCCGCTGGTCATTGCCC TGATGATCGGCCTGGGTTACCTCGGCTTCTGGATCAGCGAGCACTATGGCATTCGCGGCCTGGCCGAAAATGGCGAGCGCCAGTTGGAGCTGCATGCCCG CGCGGTAGAAAGCGAAATCAGCAAATACACCTATTTGCCCAGCCTGCTGGAACTTGAATCCAGCGTCTCGAAACTGCTCGATGACCCGACGCCCGAGCAC CGCAAGACCGTCAACGAATACCTCGAAGGCCTCAACCGACGCAGTCGCAGCCGGGCCATCTATGTAATGGACACCACCGGCCGAGTCATGGCCACCAGCA ATTGGCGCGACGTCGACAGTTACCTGGGCGAAGACCTGTCCTTTCGCGCGTATTTCCAGAACGCCGTGCGCGGCCAGCCGGGACGTTTCTACGGCATCGG CAGCACCAGTGGCGAACCCGGTTATTACCTGGCCCATGGCCTGGAGCAACAGGGCAAGATCATCGGCGTAGCCGTGGTCAAGGTCCGCCTCGAAGCCATG GAGGAACGCTGGCAGCGCGCCCGCCTGGAAGCGTTCGTCAGCGATGAGAACGGCATCATTATCTTGTCCAGCGACCCGGCACGGCGGCTCAAGTCGGTGC GGCCGCTGAGTGACGAAACCAAGGAGCGCCTGGCCCGCAGCCTTCAGTACTACTGGTTCCCGCTGAACGAGCTGATCCCCTTGGCGCGGGAACGGCTTGC CGAAGGCATGGAGAAACTGACCTTCCCCGCCAACACCGAAATCGCGGCCGACGAGCGTGCCACCAGTTACCTTTCCCAGACCCGACCGCTGAGCGACACG CCGTGGAATTTCACACTATTGACCCCGCTTGAAGACCTTCGTCGCCAAGCCATCAACCAAGGCATCCTGGTGGCCGTGGCGTTTGCGCTGGTGGCTTTCC TGCTGATCGCCTGGAACGAGCGCCGCAAAGTCATCGCCACCCGCCTCGCCGCTCGCGAAGCATTGCAGGAGGCCAATAATCAGCTGGAGCGTCGGATTAC CGAACGCACCGCCGATCTGCGGGCCAGCAACGAACGGCTCAAGGGTCAGATCCGCGAACGACGGCAGGCCGAAGAGACGTTGCGCCGGGCCCAGGACGAG TTGGTACAGGCCGGGAAACTGGCGGCCATCGGCCAGATGTCCACCAGCATCGCCCATGAACTCAACCAGCCGCTGGCCGCCCTGCGTACCCTGTCGGGCA ATACCGTGCGCTTCCTGGAGCGTGGCCAGCTGGACATCGCCAGCGGCAACCTGCGGACCATCAACGACCTGATCGACCGCATGGGCCGGATCACCGCCAG CCTGCGCGCCTTCGCCCGGCGCGGCGATGACAAAGGCCGGGCAAGCCTGGGCAAGGCCGTCGAGGCCGCGCTGCAATTGCTGGGCGCGCGCCTTGAAAAA CTCCCTGTCCAGATCCACACGGCCTTCGAAGACGTACAGGTTCAGATCGACCAGACTCGCCTGGAGCAGGTCCTGGTGAACCTGATCGGCAATGCCCTGG ACGCCATGCAGCTCCAACCGGCGCCGACGCTGTGGCTCGAAGGCCAGGGCAGCGACGGCAAATATCGCCTGCGGGTGCGGGACAATGGCCACGGCATCGA CCCGCAAGCACGTAAACATCTGTTCGAACCGTTCTTCACCACCAAACCTGGCGAACAAGGCCTGGGCCTCGGCCTGACACTTTCGGCAAGCCTGTGCGCC GCCGCCGGAGGGCATTTGGGCGTCGAGCACCCGGACGACGGTGGTACTACGTTTATCCTCAGTTTACCGTTGGTAAGCCTTTCACCTGCCGAGCCGCTAT GA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
ACCACGACCTGAGCGTACTGATCGTCGAAGACGACCCCCACGTCCTGCTGGGCTGCCAGCAGGCCTTGAGCCTGGAAGACATTCCCTGCATCGGCGTGGG CAGTGCCGAAGAGGCCCTGGAGCGGGTCGACGATAACTTTGCCGGCATCGTCATCAGCGACATTCGCCTGCCGGGCATCGACGGCCTGGAACTGCTGACC CGCCTAAAGGCGCGGGACCGCAGCCTGCCAGTAGTGCTGATCACCGGTCACGGCGACATTTCCATGGCCGTCGATGCCATGCAGAAAGGCGCCTACGACT TCATGGAGAAACCGTTCTCCCCTGAGCGCCTGGTCGACGTGGCACGCCGCGCCCTGGAGCAGCGCAGCCTGGCTCGGGAAGTGTCTTCGCTGCGTCGGCA ACTGGCCGAGCGTGACTCCCTGGAAGGCCGGATCATCGGCCGCTCGCCGGCCATGCAGCACCTGCGCGAGCTGATTGCCAACGTTGCCGACACCTCGGCC
Amino Acid Sequence
>histidine kinase
MKCDPTLYRAAPPSLAVKPRLIRHLFLPPLVIALMIGLGYLGFWISEHYGIRGLAENGERQLELHARAVESEISKYTYLPSLLELESSVSKLLDDPTPEH RKTVNEYLEGLNRRSRSRAIYVMDTTGRVMATSNWRDVDSYLGEDLSFRAYFQNAVRGQPGRFYGIGSTSGEPGYYLAHGLEQQGKIIGVAVVKVRLEAM EERWQRARLEAFVSDENGIIILSSDPARRLKSVRPLSDETKERLARSLQYYWFPLNELIPLARERLAEGMEKLTFPANTEIAADERATSYLSQTRPLSDT PWNFTLLTPLEDLRRQAINQGILVAVAFALVAFLLIAWNERRKVIATRLAAREALQEANNQLERRITERTADLRASNERLKGQIRERRQAEETLRRAQDE LVQAGKLAAIGQMSTSIAHELNQPLAALRTLSGNTVRFLERGQLDIASGNLRTINDLIDRMGRITASLRAFARRGDDKGRASLGKAVEAALQLLGARLEK LPVQIHTAFEDVQVQIDQTRLEQVLVNLIGNALDAMQLQPAPTLWLEGQGSDGKYRLRVRDNGHGIDPQARKHLFEPFFTTKPGEQGLGLGLTLSASLCA AAGGHLGVEHPDDGGTTFILSLPLVSLSPAEPL
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site